DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMED2 and opm

DIOPT Version :10

Sequence 1:NP_001308374.1 Gene:TMED2 / 10959 HGNCID:16996 Length:208 Species:Homo sapiens
Sequence 2:NP_572994.1 Gene:opm / 32435 FlyBaseID:FBgn0264389 Length:242 Species:Drosophila melanogaster


Alignment Length:221 Identity:50/221 - (22%)
Similarity:92/221 - (41%) Gaps:31/221 - (14%)


- Green bases have known domain annotations that are detailed below.


Human     7 LLVLLAALLATVSG-------YFVSIDAHAEECFFERVTSGTKMGLIFEVAEGGFLDIDVEITGP 64
            ||:.:||||..|..       ..|.:||...||.:..|..|..:...::|.:||..|:|:..|..
  Fly    13 LLLSIAALLLGVQDAEAYDKEMTVYVDAGKTECLYHSVRQGETIDFEYQVIDGGHGDLDISFTLL 77

Human    65 DNKG--IYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEGGG 127
            |..|  |....::....:......:|.|:|||.|..|....|.|.|.:.:..  :|::::    |
  Fly    78 DPIGLVIVSDFKKPENVHRHEVAKEGDYRFCFDNSFSMFNRKTVFFELIVER--EGEELQ----G 136

Human   128 DT----------------WDAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRV 176
            ||                :|.....:.:.|..:.:.:|..:..|:.:...|...|.:.::...:|
  Fly   137 DTQWNEADELTGLSRDEYYDMKVQDIMDFIGRIRLQLTKARQLQDVLRSHEARDRNLAESNFQKV 201

Human   177 VLWSFFEALVLVAMTLGQIYYLKRFF 202
            ..||..:...::.:.|.|::.|:..|
  Fly   202 NHWSMVQISAMIGVGLIQVFMLRSIF 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMED2NP_001308374.1 EMP24_GP25L 20..203 CDD:426051 43/208 (21%)
opmNP_572994.1 EMP24_GP25L 33..227 CDD:426051 42/199 (21%)

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