DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TMED2 and p24-2

DIOPT Version :10

Sequence 1:NP_001308374.1 Gene:TMED2 / 10959 HGNCID:16996 Length:208 Species:Homo sapiens
Sequence 2:NP_788617.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster


Alignment Length:210 Identity:53/210 - (25%)
Similarity:90/210 - (42%) Gaps:30/210 - (14%)


- Green bases have known domain annotations that are detailed below.


Human     8 LVLLAALLATVSGYFVSIDAHAEECFFERVTSGTKMGL-----IFEVAEGGF------LDIDVEI 61
            |.|:..:|.:..|.:..|.....:||.|.|...|.:.:     :::....||      :.:.||:
  Fly     8 LALILCVLHSACGLYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVEV 72

Human    62 TGPDNKGIYKGDRESSGKYTFAAHMDGTYKFC-FSNRMSTMTPKIVMFTIDIGEAPKGQDMETEG 125
            ...|:|.:......|.|:.:|.:|..|.:..| |||..:..:...:...:||           :.
  Fly    73 RDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDI-----------QV 126

Human   126 GGDTWD----AHQNKLEEM---INELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFE 183
            |....|    |.:.||.|:   |.:|...:..:..||.|...||...|..:::|||||:.||..:
  Fly   127 GEHAIDYAHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQ 191

Human   184 ALVLVAMTLGQIYYL 198
            .:|||.|....::.|
  Fly   192 TVVLVCMGFWHLFNL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMED2NP_001308374.1 EMP24_GP25L 20..203 CDD:426051 50/198 (25%)
p24-2NP_788617.1 EMP24_GP25L 20..206 CDD:426051 49/196 (25%)

Return to query results.
Submit another query.