DRSC/TRiP Functional Genomics Resources

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Protein Alignment AFG3L2 and Rpt4R

DIOPT Version :10

Sequence 1:NP_006787.2 Gene:AFG3L2 / 10939 HGNCID:315 Length:797 Species:Homo sapiens
Sequence 2:NP_648525.1 Gene:Rpt4R / 39351 FlyBaseID:FBgn0036224 Length:398 Species:Drosophila melanogaster


Alignment Length:395 Identity:118/395 - (29%)
Similarity:187/395 - (47%) Gaps:71/395 - (17%)


- Green bases have known domain annotations that are detailed below.


Human   182 KGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYI 246
            |.:.|:.:|||..:                        :..|.:|:.||.              :
  Fly    36 KALRDKYKVVNAEY------------------------EKSEDDLKALQS--------------V 62

Human   247 AESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGM-------GGLFSVGETTAKVLK---D 301
            .:..|..|..:.|...|:     ....||..:....|.:       |...::..||..:::   .
  Fly    63 GQMVGEILKQLTPDNFIV-----KASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPR 122

Human   302 EID-------------VKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGT 352
            |:|             |.:.::.|..:...|:.|.:.. |.||..:..:|...|||.:|.|||||
  Fly   123 EVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGT 187

Human   353 GKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRG 417
            ||||||:|.|.:.:..|:.|..|..::.::|.....:|::||.||.:.|||:|:|||||:|.:|.
  Fly   188 GKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRF 252

Human   418 RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKG 482
            ........|.:.||.:||.:||||:....|.::..|||||.||||||||||.||::.|..|:...
  Fly   253 SEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVA 317

Human   483 RASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQ 547
            |..|.|:|..||.....::.:.:. ||:.|   |:|||:.|:|.||.|.|.|...:.:.|:.|.:
  Fly   318 RMDILKIHAEPLNKRGEIDYEAVV-KLSDL---FNGADLRNICTEAGLFALRCDREFVIQEDFMK 378

Human   548 AIERV 552
            |:.::
  Fly   379 AVRKI 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AFG3L2NP_006787.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..126
HflB 151..747 CDD:440233 118/395 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 759..797
Rpt4RNP_648525.1 PRK03992 13..388 CDD:179699 118/395 (30%)
Blue background indicates that the domain is not in the aligned region.

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