DRSC/TRiP Functional Genomics Resources

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Protein Alignment AFG3L2 and YME1L

DIOPT Version :10

Sequence 1:NP_006787.2 Gene:AFG3L2 / 10939 HGNCID:315 Length:797 Species:Homo sapiens
Sequence 2:NP_001246473.1 Gene:YME1L / 37636 FlyBaseID:FBgn0034792 Length:740 Species:Drosophila melanogaster


Alignment Length:580 Identity:220/580 - (37%)
Similarity:324/580 - (55%) Gaps:82/580 - (14%)


- Green bases have known domain annotations that are detailed below.


Human   203 GKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDG---------------- 251
            |.||:..:.:           |.|....:|   .|.|:...:.||.::|                
  Fly   201 GDTPLQAEKL-----------RRLLAKSEE---HGFNKAESLKIAFAEGYLAAANSEDSPKSGKT 251

Human   252 -SFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTA--------------KVLKD 301
             .:|.::...|:|:.||                   |:|....||:              :|..:
  Fly   252 MKYLKTLQTIVVIVVFL-------------------GIFLSFFTTSNGSVFRSIQLGNQVEVDPE 297

Human   302 EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEAN 366
            ||:|.|:||.||:|||.|:.|.|.|||:|:::.:||.|:|||.:|.|||||||||||:|.||||.
  Fly   298 EINVTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAK 362

Human   367 VPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTL 431
            |||...:|.||.|:.||.|..||||||..|:..|||::||||||:||.||........:.|  |:
  Fly   363 VPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKRTNSVLHPYANQ--TI 425

Human   432 NQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKL 496
            ||||.|||||:....|::|..|||.|.||.|||||||||.::.:..||..||..|..::|..: |
  Fly   426 NQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSLYLTKI-L 489

Human   497 DSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQ 561
            ...::.|.|||.    |.||:|||:.|:.|:|||.||...:::::.||.|.|.::|:.|.|:|.:
  Fly   490 HDEIDLDMLARG----TSGFTGADLENMINQAALRAAIDGAETVSMKHLETARDKVLMGPERKAR 550

Human   562 VLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLP-KEQYLYTKEQLLDRM 625
            :...|.....||||.|||:..:|.:.:.||.||:|:|||..||:..|:| ||:|..||.|||..|
  Fly   551 LPDEEANTITAYHEGGHAIVAFYTKESHPLHKVTIMPRGPSLGHTAYIPEKERYHVTKAQLLAMM 615

Human   626 CMTLGGRVSEEIFFG--RITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPR---QGDMVL 685
            ...:|||.:||:.||  :||:||..||::.|..|...:..:||::|||..:.:..:   .||.: 
  Fly   616 DTMMGGRAAEELVFGTDKITSGASSDLKQATSIATHMVRDWGMSDKVGLRTIEASKGLGTGDTL- 679

Human   686 EKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELL 745
                ...|...:|.|::.:::|:|:|..|:|.:...:.:.:|..||:.|.||.:|:..:|
  Fly   680 ----GPNTIEAVDAEIKRILSDSYERAKAILRKHTREHKALAEALLKYETLDADDIKAIL 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AFG3L2NP_006787.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..126
HflB 151..747 CDD:440233 220/580 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 759..797
YME1LNP_001246473.1 HflB 258..737 CDD:440233 208/509 (41%)
Blue background indicates that the domain is not in the aligned region.

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