DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PRDX3 and tpx1

DIOPT Version :10

Sequence 1:NP_006784.1 Gene:PRDX3 / 10935 HGNCID:9354 Length:256 Species:Homo sapiens
Sequence 2:NP_588430.1 Gene:tpx1 / 2539572 PomBaseID:SPCC576.03C Length:192 Species:Schizosaccharomyces pombe


Alignment Length:186 Identity:115/186 - (61%)
Similarity:149/186 - (80%) Gaps:4/186 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    69 APYFKGTAVVNGEFKDLSLDDFKGKYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVS 133
            ||.|||||||||.|:::.|.|:|||::.|.||||||||||||||||||:.|::|.:.|.:|:..|
pombe     9 APDFKGTAVVNGAFEEIKLADYKGKWVFLGFYPLDFTFVCPTEIVAFSEAASKFAERNAQVILTS 73

Human   134 VDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGSGLALRGLFIIDPNGVIKHL 198
            .||.:||||:||||||.||||.:||.||:|.:.::|||||||:|.:|:|.||||:|||.||::.:
pombe    74 TDSEYSHLAFINTPRKEGGLGGINIPLLADPSHKVSRDYGVLIEDAGVAFRGLFLIDPKGVLRQI 138

Human   199 SVNDLPVGRSVEETLRLVKAFQYVETHGEVCPANWTPDSPTI-KPSPAASKEYFQK 253
            ::|||||||||:|.|||:.|||:||.|||||||||...|.|| ..:|   ::||.|
pombe   139 TINDLPVGRSVDEALRLLDAFQFVEEHGEVCPANWHKGSDTIDTKNP---EKYFSK 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRDX3NP_006784.1 PRX_Typ2cys 65..236 CDD:239313 108/166 (65%)
tpx1NP_588430.1 PRX_Typ2cys 5..176 CDD:239313 108/166 (65%)

Return to query results.
Submit another query.