DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc5a10 and CG33124

DIOPT Version :9

Sequence 1:XP_006532041.1 Gene:Slc5a10 / 109342 MGIID:1926089 Length:611 Species:Mus musculus
Sequence 2:NP_001097056.3 Gene:CG33124 / 318891 FlyBaseID:FBgn0053124 Length:588 Species:Drosophila melanogaster


Alignment Length:603 Identity:135/603 - (22%)
Similarity:228/603 - (37%) Gaps:161/603 - (26%)


- Green bases have known domain annotations that are detailed below.


Mouse    65 LNVAVGIW---------------------SACRANKNTVSGYFLAGRDMAWWPIGASLFASSEGS 108
            |::|:|::                     |........::.|.:....:..:|:..||.||    
  Fly    20 LSIAIGLYFGWIKKTKKEMESSPADTPEISIPNFGSKKMNEYLMGSGHLKVFPVAMSLIAS---- 80

Mouse   109 GLFV-GLAGSGAAGGLAVAGFEWNIVTLP-------------------------EYIQKRFGGQR 147
              |: |:|..|....:...|.:::::.|.                         ||:..|| ...
  Fly    81 --FISGVAILGNPSEIYYYGTQYSLIVLAIVIQGLAVSYIYLPVFSALQVRSSYEYLGMRF-HPL 142

Mouse   148 IRTYLSVLSLMLSVFTKISIDLYAGALFVHICLGWNFYLSTILTLAITALYTIAGGLATVIYTDA 212
            ||..:|:: .::.|.......::..||.::...|.|.::..:|.:.:..:||:.|||..|::||.
  Fly   143 IRNIVSIM-FVIEVLLYTPFVVFVPALALNQASGLNIHMIEVLIIVVCVIYTLLGGLKAVVHTDI 206

Mouse   213 LQTIIMVVGAVILAVKAFNQIGG----YEQL----EAAYAQAIPSRTIPNTTCHLPRADAMHMFR 269
            .|.:||....|::|:.|...|..    :|.|    ...:....||..:.||...:....|.:   
  Fly   207 WQVVIMFASVVVVAILATCYITDLDDFFESLVDGGRLIFGNINPSPYVRNTVWSVVIGGAFY--- 268

Mouse   270 DPSTGDLPWTGMTFGLTIMATWYWCTDQVIVQRSLSARNLNHAKA-------GSILASYLKMLPM 327
                    ||.:|           ...|.:|.|.:|..||..|:.       |||: .|..:..:
  Fly   269 --------WTSIT-----------AVHQTMVHRYMSLPNLKMARTSIAFFVLGSII-FYSVLSFL 313

Mouse   328 GLMIMPGMISRVLFPDDVGCVVPSECLRACGAEIGCSNIAYPKLVMELMP--IGLRGLMIAVMMA 390
            ||:|..      ::.|         |......:|..::...|..|::.:.  .|:.||.||.:..
  Fly   314 GLLIFN------MYKD---------CDPLSAGQIMNNDQLVPLFVVQSVGHIYGIPGLFIAGIFG 363

Mouse   391 ALLSSLTSIFNSSSTLFTMDIWR---QLRPSAGERELLLVGRLVIVVLIGVSVAWIPVLQGSNSG 452
            |.||||:...||:|.:...||.|   :::|  ||....::.:..||:: |..|....:|....||
  Fly   364 AGLSSLSVFLNSTSLVILQDIVRGCFKMQP--GETASAIIVKATIVIM-GALVFGEVLLLEKVSG 425

Mouse   453 QLFIYMQSV---TSSLAPPVTAIFILGIFWRRANEQGAFWGLMAGLVV--------------GAL 500
            .|.|.|..|   |||    ...||.|.:....||..|...|.:||.::              |.|
  Fly   426 ILSICMSLVAIATSS----TFGIFTLAVLVPWANTVGTAVGGIAGFLLTGWITFGSQIAAASGQL 486

Mouse   501 ---RLVLEFLYPEPPC-GQIDTR-----------PAPLRSLHYLHFAIALFLLTCAVMAAGSLLS 550
               ||.:..    ..| |.:..|           |....|.|:::...||     .|:..|||:|
  Fly   487 HHHRLPVSV----ASCPGNVTARENVWVDEEQVFPLFRLSFHWINPIGAL-----TVVVVGSLVS 542

Mouse   551 PPPQQRQIENLTWWTLAP 568
            ...:...|::|....::|
  Fly   543 LVTKPTDIKSLDSDLISP 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc5a10XP_006532041.1 SLC5-6-like_sbd 52..611 CDD:382020 135/603 (22%)
CG33124NP_001097056.3 SLC5sbd_NIS-SMVT 9..533 CDD:271383 127/574 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836544
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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