DRSC/TRiP Functional Genomics Resources

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Protein Alignment BTNL3 and ncam-1

DIOPT Version :9

Sequence 1:NP_932079.1 Gene:BTNL3 / 10917 HGNCID:1143 Length:466 Species:Homo sapiens
Sequence 2:NP_741709.1 Gene:ncam-1 / 180418 WormBaseID:WBGene00017184 Length:955 Species:Caenorhabditis elegans


Alignment Length:121 Identity:28/121 - (23%)
Similarity:48/121 - (39%) Gaps:23/121 - (19%)


- Green bases have known domain annotations that are detailed below.


Human   108 DIGLYGCWFSSQIYDEEATWELRVAALGSLPLISIVGYVDGG-------IQLLCLSSGWFPQPTA 165
            |.|:|.|  ::..|....|..:.|... :.|.|::....:|.       |:|.|.:.| .|:||.
 Worm   214 DDGIYNC--NAAQYSSFETLSVNVTGY-ARPTITVFDVPNGNRGIEGHTIELKCGAVG-KPKPTY 274

Human   166 KWKGPQGQDLSSDSRANADGYSLYDVEISIIV-----QENAGSILCSIHLAEQSHE 216
            ||       ...|..........::||..:::     .|:||:..|..:....|:|
 Worm   275 KW-------FFEDDEVPIARSDKHNVEEGLLIIESLNSEDAGTYKCVANNTVGSNE 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BTNL3NP_932079.1 Ig_MOG_like 33..132 CDD:319291 6/23 (26%)
SPRY_PRY_C-I_1 289..461 CDD:293968
ncam-1NP_741709.1 IG 64..142 CDD:214652
Ig 69..140 CDD:143165
IG_like 153..236 CDD:214653 6/23 (26%)
Ig 160..222 CDD:299845 4/9 (44%)
IG_like 256..330 CDD:214653 18/76 (24%)
IGc2 256..320 CDD:197706 16/71 (23%)
IG_like <445..499 CDD:214653
Ig <445..498 CDD:143165
IG_like 520..596 CDD:214653
IGc2 520..587 CDD:197706
FN3 <652..701 CDD:238020
FN3 <817..873 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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