Sequence 1: | NP_001297459.1 | Gene: | Chd9 / 109151 | MGIID: | 1924001 | Length: | 2885 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001137761.1 | Gene: | kis / 33185 | FlyBaseID: | FBgn0266557 | Length: | 5517 | Species: | Drosophila melanogaster |
Alignment Length: | 4114 | Identity: | 1167/4114 - (28%) |
---|---|---|---|
Similarity: | 1648/4114 - (40%) | Gaps: | 1377/4114 - (33%) |
- Green bases have known domain annotations that are detailed below.
Mouse 33 VSLVDELNLGAEFEPLHIDSLNHVQGTPTHQKMADFEQLSQFDSMKFHPVNQSFGSPVEHVL--- 94
Mouse 95 -------------SPHSQFNCSPIHPPNQPNGLFQDVADGSPMWGHQTATGLANQNGSPFHQP-- 144
Mouse 145 ----GHSHSLHQNKSFVAHPDFALFQASEHQTQCSSLHSQ-QSRSNLNPG-----QNSLGQAKNF 199
Mouse 200 LDANVSGAHRVNVNHLATAPSSQ--QTLPVQFSPTANPPAHFLKCSSHQEG---------NYNRP 253
Mouse 254 ------------------------SPSMTSCSVSNS---QQFP---SHYSFSSGHVSPSSLLQSS 288
Mouse 289 AGLAPGHTNQALSDFAGSNSFSPHRGMKQEPTQHLLNPTPSLNSNNFQILHSSHPQGNYSNSKLS 353
Mouse 354 PVHMNFPDPVDAGPPV-----------GHFNDHAETNG-FSSLEEN-----LLHHVDSHAEPFAG 401
Mouse 402 LDPEDLLQEGLLPQFDESPF----------------GQDNSNHVLDHDLDRQFTSHLVSRPSDMA 450
Mouse 451 QTQLQYQA---------RGWPSPLSTNHQHLHSRNHL------------CLQRQPPSSKKSDG-- 492
Mouse 493 -SGTYTKLQNTQVR----------------------VMSEKKPRKRVESESKQEKANRIISEAIA 534
Mouse 535 R---AKERGER--NIPRVMSPENFPSASVEGKEEKR--------GRRMKSKPK-------DRDN- 578
Mouse 579 -----------------KKPKTYS----KLKEKTKIGKLIITLGK-----KHKRRNESSDELSDA 617
Mouse 618 EQR----------SQHTFKEQHSQKRRSNRQIKRKKYAEDAEGK---------QSE--------- 654
Mouse 655 --EEVKGSLRVKRNSAPPPGEQPLQLFVENPSEEDAAIVDKI----------------------- 694
Mouse 695 -LACRTVKKEVSPG----------------------VMLDIEEFFVKYKNYSYLHCEWATEQQLL 736
Mouse 737 K-DKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVEVDRILEVSFCEDKDTGESVIYYLVKWC 800
Mouse 801 SLPYEDSTWELKEDVDLAKIEEFEQLQ--ASRPDTRHLDRPPSNIWKKIEQSREYKNGNQLREYQ 863
Mouse 864 LEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRT 928
Mouse 929 WTDINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIDWRCV 993
Mouse 994 IIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG 1058
Mouse 1059 DLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKG 1123
Mouse 1124 AGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDFHLQAMIQSAGKLVLIDK 1188
Mouse 1189 LLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1253
Mouse 1254 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDR 1318
Mouse 1319 ASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDIDQILL 1383
Mouse 1384 RRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDTI--SGRNSLVIDT 1446
Mouse 1447 PRIRKQTRPFSATKDELAELSEAESEGE--------------EKPKLRR-----------PCDRS 1486
Mouse 1487 ------------GGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEVICRALLAYCL 1539
Mouse 1540 IHYRGDEKIKGFIWDLITPTEDGQTREL-QNHLGLSAPVPRGRKGKK-------VKT-------- 1588
Mouse 1589 ----------QTSSFDIQKAE---------------------WLR--KYNPEQLLQDEGYKKHVK 1620
Mouse 1621 HHCNKVLLRVRMLYYLKQEVIGNESQKVFDGVDASDIDVWVPEPDHSEVPAAWWD-FDADKSLLI 1684
Mouse 1685 GVFKHGYEKYNTIRADPALCFLERVG---KPDDKAVAA----EQRAND-YMDGD----------- 1730
Mouse 1731 ---------------VEDPE---------------------------------YKPA-------- 1739
Mouse 1740 ----------------------PAIFKDDIE---------DDVSSP----------------GDL 1757
Mouse 1758 VI----ADGEGQL---------------------MEGDK-------------------------- 1771
Mouse 1772 ------------------------------------------------VYWPTPSALTTRLRRLI 1788
Mouse 1789 TAYQRTNKNRHIQQMQ-----------PTFSLP-------------------------------- 1810
Mouse 1811 ANAMQPLYEE------------------------------------------------------- 1820
Mouse 1821 ---------------ATLNPKM--------AAKIERQQR-------WTRREEADFYRVVSTFGV- 1854
Mouse 1855 --VFDP---DRGQF---DWTKFRALARLHKKTDNSLEKYLCAFMSMCRRVCRLPSKEELVDPNIF 1911
Mouse 1912 IQPITEERASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPIWWECGSHDRDLLIGAAKH 1976
Mouse 1977 GVSRTDYHILRDPELSF--------------------------------MAAQRNYNQSKAAHSR 2009
Mouse 2010 TSA----------------PLLQQYQVALSASPLTSLPRLLGAKGTLLEDMKVKSESLTEEPQSS 2058
Mouse 2059 E--EESMSSMETRTRVKSE----PVSPKNGVLSQATGDQKSGGKSETDRRMVAARTEPLTPNPAS 2117
Mouse 2118 KKPR----------VHKRGSQSSSD---SDSDSARSSCSSRSS-----------SSSSSSSSCSH 2158
Mouse 2159 SRSGSSSSSSSSC---------------SSASSSSSSSSSSSSSSSSSSSEESDSEEDVQKRE-G 2207
Mouse 2208 TPHRKAYDEESVASLSTTQDETQDSFQANN---------------------------GTPESAYL 2245
Mouse 2246 LQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWP-----------------------------S 2281
Mouse 2282 ARRHYDANTVASFYT----TKLL----------DSPGAATERGEP-------------------S 2313
Mouse 2314 VPTPPAVAV-----------------------------------------------REEH-EQSA 2330
Mouse 2331 QMSKVKKHVREKEFTVKIKD------------------EGG----------------LKLTFQKQ 2361
Mouse 2362 GL-------AQKRPFDGEDGALGQQQYLTRL---RELQSTSETSLVNLPK----AVPASGTSIQ- 2411
Mouse 2412 ------PTLGANGAILDS-------------QPIVKKRRGRRRNVEGADILFLNRNKPPNHIPTG 2457
Mouse 2458 MNPALSYPQPQRIPDTESPVPVINL------------------------KDGTRLAGD------- 2491
Mouse 2492 ----------------------------------------------------------------- 2491
Mouse 2492 ----------------DAPKRKDLDRWLKEHPG---------YVEDLGAF--------------- 2516
Mouse 2517 ------------IPRVQLHEGRPKQKRHRCRNPNKLDINSLTGEERVQLINRRNARKVGGAFAPP 2569
Mouse 2570 LKDLCRFLKENSEYGVAPEW-----------------------GDVVKQSGFLPESMFERILTGP 2611
Mouse 2612 VVREE-------------VSRRGRRPKSGIAKATTAAAVPAGSVPG-NP-LLANGLLPGV----- 2656
Mouse 2657 --DLTALQALQ----------------QNLQNLQSLQVTAGLMGMPAGLS--SGGETKNMAAMFP 2701
Mouse 2702 MLFSGMAGLPNLLGMGGLLSKTAESGAEEKRGNDSKELEGKKERTESQSPENGGERCVPG-SPST 2765
Mouse 2766 SSTAA---LSSAAAAKPIALN-PLLLSN--ILYPGMLLTPGLN---------------------- 2802
Mouse 2803 LHLPTLSQSNAFDVQKNKSDDLDSSKSVEIKEENSRVRDQEEKGGTEPSPLNE-NSTDEGSERAS 2866
Mouse 2867 SGSDSSSSSSEDSDSSNED 2885 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Chd9 | NP_001297459.1 | ROM1 | 158..>362 | CDD:227709 | 46/250 (18%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 173..195 | 7/27 (26%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 242..263 | 5/53 (9%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 283..347 | 11/63 (17%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 479..677 | 63/299 (21%) | |||
PTZ00121 | <510..>765 | CDD:173412 | 90/378 (24%) | ||
CD1_tandem_CHD5-9_like | 685..749 | CDD:349315 | 33/110 (30%) | ||
CD2_tandem_CHD5-9_like | 769..827 | CDD:349310 | 32/57 (56%) | ||
PLN03142 | 858..>1479 | CDD:215601 | 417/636 (66%) | ||
DEXHc_CHD9 | 859..1080 | CDD:350819 | 146/220 (66%) | ||
LXXLL motif 1 | 867..871 | 3/3 (100%) | |||
DEAH box | 996..999 | 2/2 (100%) | |||
LXXLL motif 2 | 1035..1039 | 3/3 (100%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1460..1484 | 9/48 (19%) | |||
LXXLL motif 3 | 2030..2034 | 0/3 (0%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2046..2238 | 45/264 (17%) | |||
Binds A/T-rich DNA. /evidence=ECO:0000250 | 2331..2471 | 33/207 (16%) | |||
A.T hook-like | 2428..2435 | 2/6 (33%) | |||
BRK | 2472..2512 | CDD:369408 | 12/160 (8%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2473..2494 | 7/132 (5%) | |||
BRK | 2546..2590 | CDD:197800 | 21/66 (32%) | ||
LXXLL motif 4 | 2710..2714 | 1/3 (33%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2724..2770 | 8/46 (17%) | |||
LXXLL motif 5 | 2782..2787 | 1/5 (20%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2818..2885 | 15/67 (22%) | |||
kis | NP_001137761.1 | BASP1 | 1554..1786 | CDD:283191 | 50/233 (21%) |
HepA | 1676..2527 | CDD:223627 | 466/853 (55%) | ||
SDA1 | <1693..>1854 | CDD:283052 | 32/160 (20%) | ||
CHROMO | <1879..1919 | CDD:237991 | 25/39 (64%) | ||
Chromo | 1941..1996 | CDD:278797 | 31/54 (57%) | ||
DEXDc | 2048..2197 | CDD:238005 | 94/148 (64%) | ||
Helicase_C | 2350..2464 | CDD:278689 | 96/113 (85%) | ||
RR_TM4-6 | 3728..>3877 | CDD:283990 | 28/159 (18%) | ||
BRK | 4569..4613 | CDD:197800 | 20/43 (47%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 562 | 1.000 | Domainoid score | I239 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0384 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1497 | 1.000 | Inparanoid score | I104 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001075 | |
OrthoInspector | 1 | 1.000 | - | - | otm42511 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100621 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3575 |
SonicParanoid | 1 | 1.000 | - | - | X648 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
11 | 10.750 |