DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PNPLA6 and nte1

DIOPT Version :10

Sequence 1:NP_001159583.1 Gene:PNPLA6 / 10908 HGNCID:16268 Length:1375 Species:Homo sapiens
Sequence 2:NP_588086.1 Gene:nte1 / 2539411 PomBaseID:SPCC4B3.04C Length:1316 Species:Schizosaccharomyces pombe


Alignment Length:1384 Identity:403/1384 - (29%)
Similarity:624/1384 - (45%) Gaps:306/1384 - (22%)


- Green bases have known domain annotations that are detailed below.


Human   103 KVLFYGRKIMRKVSQSTSSLVDTSV-----SATSRPRMRKKLKMLNIA----------------- 145
            ||:|:   ::|.|:.|..|:...|:     :..:.|:...|:...::.                 
pombe    15 KVIFF---VLRSVTLSLVSVTRFSLFLLSFATITVPKWAYKIVTYSLTIQFNFKSLLFLFFVSIC 76

Human   146 -----------KKILRIQKETPTLQRKEPPPAVLEADLTEGDLANSHLPSEVLYMLKN------- 192
                       .|..|:..|.|..:.|..|...:.             |||.....:|       
pombe    77 VVILVVRYRYLNKYARLPHEAPIKEAKLGPDTNIR-------------PSEPRIGFQNYLDEFLS 128

Human   193 -VRVLGHFEKPLFLELCRHMVFQRLGQGDYVFRPGQPDASIYVVQDGLLEL-CLPGPDGKECV-- 253
             :.:.|:.|||:|:||.||:..||:.:|:.::...|  :|..:|.||..:: ..|..|..|.|  
pombe   129 AISIFGYLEKPVFVELARHIRTQRVAEGNTIYLGEQ--SSFILVVDGCFQVFTAPEKDSAEVVEE 191

Human   254 --------VKEVVPGDSVNSLLSILDVI-------TGHQHPQRT--------------------- 282
                    :.||..|..::|..::|::.       |..::|.::                     
pombe   192 AGQPEYRLLTEVSNGAPLSSFFTVLELFTELIPEATSKENPFKSTTSSLRPGSSTTTEAGANNAS 256

Human   283 -----------VSARAARDSTVLRLPVEAFSAVFTKYPESLVRVVQIIMVRLQRVTFLALHNYLG 336
                       :.|:|..|:|:..:|..||..:..|:|.|..::||:|:.|.|||||...:.|||
pombe   257 KPHMPQPKKARIIAKAKIDTTIAVIPANAFHHLVHKFPNSSAQIVQVILTRFQRVTFSTGYEYLG 321

Human   337 LTNELFSHE--IQPLRLFPSPG-----------------------------LPTRTSPVRGSKRM 370
            |::.:||.|  ...|..:..|.                             |.::.:..|.|.:.
pombe   322 LSDAIFSIEKNFNSLTAYELPNYIRSDIIDDFKKEAMSEHLSQASNESFIVLRSKGAQSRLSNQY 386

Human   371 VSTS--------ATDEPRETPGRPPDPTGAPLPGPTGDPVKPTSLETPSAPLLSRCVSMPGDISG 427
            .|.:        .:|..|.|..             .||.:..|:   |.:.|||..|        
pombe   387 FSKAFDKEHGNFVSDIDRSTAN-------------AGDLLSSTN---PHSTLLSTSV-------- 427

Human   428 LQGGPRSDFDM--AYERGRISVSLQEEASGGSLAAPARTPTQEPREQPAGACEYSYCEDE----- 485
               ||...|.:  :|.|         |.....::|..|....:...:..|...|...||.     
pombe   428 ---GPLRKFPLNRSYSR---------EVGDYDISASFRDGLLQCIFKSLGVFNYELKEDNDDLCT 480

Human   486 ------------------------SATGGCPFGPYQGRQTSSIFEAAKQ----ELAKLMRIEDPS 522
                                    |||.       :....|||..:.|:    |.||  .||   
pombe   481 ENDSSEGDSDSLKKVDFLGQIAMMSATD-------REEVKSSIVVSTKKSTILEFAK--EIE--- 533

Human   523 LLNSRVLLHHAKAGTIIARQGDQDVSLHFVLWGCLH-------VYQRMIDKAEDVCLFVAQPGEL 580
                 ::.:  |.||.|.||||....|::::.|.|.       .:....|....:..|:.:||.:
pombe   534 -----IIFY--KKGTTIVRQGDHADGLYYIIDGFLDATCPSKLTFSTSYDTDLGMHSFMIKPGGI 591

Human   581 VGQLAVLTGEPLIFTLRAQRDCTFLRISKSDFYEIMRAQPSVVLSAAHTVAARMSPFVRQMDFAI 645
            |...|.::.......:.|:.|.....:.:|....|:..:|.:.|:.|..:.:.:...:.::|||:
pombe   592 VNYQACVSNYRSFINVTARSDVLVGFLPRSCLERIIDQEPLISLTIAKRLISLVPSLLLKLDFAV 656

Human   646 DWTAVEAGRALYRQGDRSDCTYIVLNGRLRSV-IQRGSGKKEL--VGEYGRGDLIGVVEALTRQP 707
            .|..:...:.:|.:.|.|||.|:||||||||: .:|||.:.::  ..|||:||.:|.:|.|....
pombe   657 GWIHLNPDQVVYEKNDPSDCVYVVLNGRLRSIEDERGSARTQVDYFNEYGKGDSVGELEMLLNNR 721

Human   708 RATTVHAVRDTELAKLPEGTLGHIKRRYPQVVTRLIHLLSQKILGNLQQLQGPFPAGSGLGVPPH 772
            |::|:.|:||:||||:||.....:...:|.|..:|     .||:.|...|.....:..|:...||
pombe   722 RSSTLFAIRDSELAKIPETLFNALSLSHPAVGLQL-----SKIIANRMNLLLNNKSMDGMQHQPH 781

Human   773 SELTNPASNLATVAILPVCAEVPMVAFTLELQHALQAIGPTL-LLNSDIIRARLGASALDSIQEF 836
            .:     .::.|:||:|..:...::.|:.:|...|..:|.:: :|....:...||..|...:..|
pombe   782 EK-----HSIRTLAIVPSSSTGLLILFSQKLTSVLSVMGKSVKVLRQSSVLEHLGKHAFSRMGRF 841

Human   837 RLSGWLAQQEDAHRIVLYQTDASL-TPWTVRCLRQADCILIVGLGDQEPTLGQLEQMLENTAVRA 900
            :||.:|:..||.:.|::|..|:.: :.|...|:||||||.|:...||.|.:|:.||.|......|
pombe   842 KLSSYLSDLEDKYDILIYVADSGVGSAWLQTCIRQADCIYILAEADQNPNIGEYEQHLIAMKSTA 906

Human   901 LKQLVLLHREE--GAGPTRTVEWLNMRSWCSGHLHLRCPRRL---FSRRSPAK------------ 948
            .|:|||||.|.  .:|.||.  ||..|.|...|.|::....|   .|:.:.||            
pombe   907 RKELVLLHPERFCPSGLTRL--WLKERPWVYAHHHVQLRIGLDNEISQNNEAKVFLNIIRAKVQN 969

Human   949 -------------LHELYEKVFSRRADRHSDFSRLARVLTGNTIALVLGGGGARGCSHIGVLKAL 1000
                         ||.:|:   :.|| :.|||:||||.:.|..||||||||||||.|.||:|.||
pombe   970 LHYGFRKYIDWKHLHPVYQ---ANRA-QDSDFARLARRICGKAIALVLGGGGARGISQIGILYAL 1030

Human  1001 EEAGVPVDLVGGTSIGSFIGALYAEERSASRTKQRAREWAKSMTSVLEPVLDLTYPVTSMFTGSA 1065
            ||||:|.|::||||||:|.|.|||.|........||:::...|.::...|||:|||..:..||..
pombe  1031 EEAGIPFDIIGGTSIGAFNGGLYAWEADLVPMFGRAKKFCGRMANLWRFVLDVTYPQAAYTTGHE 1095

Human  1066 FNRSIHRVFQDKQIEDLWLPYFNVTTDITASAMRVHKDGSLWRYVRASMTLSGYLPPLCDPKDGH 1130
            |||.|.:.|.:..|||.|||::..||:||.|.|.:|..|..|||:||||:|:|.:||:.. ..|.
pombe  1096 FNRGIWKTFGEIHIEDFWLPFYANTTNITHSRMDIHSSGYAWRYIRASMSLAGLVPPMLS-DSGD 1159

Human  1131 LLMDGGYINNLPADIARSMGAKTVIAIDVGSQDETDLSTYGDSLSGWWLLWKRLNPWADKVKVPD 1195
            :|:||||::||.....:|:||.::.||||||:|..:...|||::||.|.|..|..|:..|...|.
pombe  1160 MLLDGGYMDNLTVSHMQSLGASSIFAIDVGSEDSREPMHYGDTVSGVWALISRWIPFIPKTSFPS 1224

Human  1196 MAEIQSRLAYVSCVRQLEVVKSSSYCEYLRPPIDCFKTMDFGKFDQIYDVGYQYGKAVFGGWSRG 1260
            :|||||||.||:.|...|.|||...|.|:|||:..|.|::||.|::||:|||.|||         
pombe  1225 LAEIQSRLTYVTSVATGEKVKSMPGCFYMRPPVKDFPTLEFGSFEKIYNVGYNYGK--------- 1280

Human  1261 NVIEKMLTDRRSTDLNESR 1279
            ..:||:.|..:..|:...|
pombe  1281 EYVEKLKTSHKLDDILSPR 1299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PNPLA6NP_001159583.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
CAP_ED 195..316 CDD:237999 38/170 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 352..436 18/120 (15%)
PHA03247 <354..502 CDD:223021 31/215 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 449..472 3/22 (14%)
CAP_ED 512..622 CDD:237999 26/116 (22%)
CAP_ED 635..743 CDD:237999 42/110 (38%)
Pat_PNPLA6_PNPLA7 964..1269 CDD:132864 148/304 (49%)
GXGXXG. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 985..990 4/4 (100%)
GXSXG. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 1012..1016 3/3 (100%)
DGA/G. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 1134..1136 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1306..1375
nte1NP_588086.1 CAP_ED 522..638 CDD:237999 28/127 (22%)
CAP_ED 641..756 CDD:237999 42/114 (37%)
Pat_Fungal_NTE1 999..1268 CDD:132865 134/269 (50%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.