DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RAB10 and Rab23

DIOPT Version :10

Sequence 1:NP_057215.3 Gene:RAB10 / 10890 HGNCID:9759 Length:200 Species:Homo sapiens
Sequence 2:NP_649574.1 Gene:Rab23 / 40701 FlyBaseID:FBgn0037364 Length:268 Species:Drosophila melanogaster


Alignment Length:167 Identity:58/167 - (34%)
Similarity:98/167 - (58%) Gaps:1/167 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65
            |.:...:|..|::::|:.||||:.::.|:....|...:..|||:||..:.:|:.|:.:::.:|||
  Fly    29 MREDDIELAIKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVRIMLWDT 93

Human    66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKR 130
            ||||.|..||.:|||||...:||:..|:..||:.|..|.|.::...|| :..:::.||.|:.::.
  Fly    94 AGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVENECNE-IPTVIVQNKIDLIEQA 157

Human   131 VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
            ||...:.|.:|:....|...||.|.:||:...|..||
  Fly   158 VVTADEVETLAKLLNCRLIRTSVKEDINVASVFRYLA 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB10NP_057215.3 Rab8_Rab10_Rab13_like 7..173 CDD:206659 57/161 (35%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 32..46 4/13 (31%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 64..81 11/16 (69%)
Rab23NP_649574.1 Rab23_like 50..197 CDD:133306 51/146 (35%)

Return to query results.
Submit another query.