DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB10 and Rab3

DIOPT Version :10

Sequence 1:NP_057215.3 Gene:RAB10 / 10890 HGNCID:9759 Length:200 Species:Homo sapiens
Sequence 2:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster


Alignment Length:196 Identity:97/196 - (49%)
Similarity:139/196 - (70%) Gaps:9/196 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66
            |.:.:|.:||||:||:|.||||..|||::||:|.:.|:||:|||||:|||....|::||||||||
  Fly    14 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTA 78

Human    67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRV 131
            ||||:.||||:|||||||.:|:||:||..||.::..|:..|..::.::.:.:|:||||||:|:||
  Fly    79 GQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRV 143

Human   132 VPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISS---GGGVT 193
            :...:|.|:|.:.|:.|||||||.|:|::..|..|.:.|..|.      ||::|...   |||..
  Fly   144 ISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKM------SESLDADPTLVGGGQK 202

Human   194 G 194
            |
  Fly   203 G 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB10NP_057215.3 Rab8_Rab10_Rab13_like 7..173 CDD:206659 88/165 (53%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 32..46 7/13 (54%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 64..81 13/16 (81%)
Rab3NP_523687.1 Rab3 21..185 CDD:206657 87/163 (53%)

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