DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB10 and Rab9

DIOPT Version :10

Sequence 1:NP_057215.3 Gene:RAB10 / 10890 HGNCID:9759 Length:200 Species:Homo sapiens
Sequence 2:NP_609966.1 Gene:Rab9 / 35221 FlyBaseID:FBgn0032782 Length:256 Species:Drosophila melanogaster


Alignment Length:213 Identity:65/213 - (30%)
Similarity:108/213 - (50%) Gaps:33/213 - (15%)


- Green bases have known domain annotations that are detailed below.


Human     9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHT 73
            |.|::::||.||||:.:|.||..:.:......|||::|..|.:.:.|::..||||||||||||..
  Fly    12 LLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQIWDTAGQERFRA 76

Human    74 ITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVER---MLLGNKCDMD-DKRVVPK 134
            :.|.:|||:...:|.|.:.:..|.:.:..|......:|:.|.::   :::|||.|:. .||.|..
  Fly    77 LRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADVDQDKFPFIVVGNKNDIPAQKRQVSS 141

Human   135 GKGEQIAREHGIR-FFETSAKANINIEKAFL----------TLAEDILRKTPVKEPNSENVDIS- 187
            ...:|...|..:. ..|||:||..|:..||:          .:||..||:      :.:.:|:: 
  Fly   142 DAVQQWCAEQKVACHIETSSKAATNVTDAFVLGLRQWRHMECVAEAELRQ------HGDTIDLTR 200

Human   188 -----------SGGGVTG 194
                       :|||..|
  Fly   201 PIRLVQRRICCTGGGGGG 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB10NP_057215.3 Rab8_Rab10_Rab13_like 7..173 CDD:206659 59/178 (33%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 32..46 3/13 (23%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 64..81 10/16 (63%)
Rab9NP_609966.1 Rab9 8..178 CDD:206697 56/165 (34%)

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