DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB10 and Rab6

DIOPT Version :10

Sequence 1:NP_057215.3 Gene:RAB10 / 10890 HGNCID:9759 Length:200 Species:Homo sapiens
Sequence 2:NP_477172.1 Gene:Rab6 / 34636 FlyBaseID:FBgn0015797 Length:208 Species:Drosophila melanogaster


Alignment Length:194 Identity:79/194 - (40%)
Similarity:118/194 - (60%) Gaps:15/194 - (7%)


- Green bases have known domain annotations that are detailed below.


Human    10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTI 74
            |||:.:|:..||||.::.||..|:|:.|:.:||||||..||:.|:.:.::||:|||||||||.::
  Fly    13 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 77

Human    75 TTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQ 139
            ..||.|.:...::||||||..||...|||:.::......||..||:|||.|:.|||.|...:||:
  Fly    78 IPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGER 142

Human   140 IAREHGIRFFETSAKANINIEKAFLTLA--------------EDILRKTPVKEPNSENVDISSG 189
            .|:|..:.|.||||||..|:::.|..:|              || :::..:|:..:|..|...|
  Fly   143 KAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPSED-MQEVVLKDSPNETKDPEGG 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB10NP_057215.3 Rab8_Rab10_Rab13_like 7..173 CDD:206659 75/176 (43%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 32..46 7/13 (54%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 64..81 10/16 (63%)
Rab6NP_477172.1 Rab6 13..173 CDD:206654 73/159 (46%)

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