DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RAB10 and Rab21

DIOPT Version :10

Sequence 1:NP_057215.3 Gene:RAB10 / 10890 HGNCID:9759 Length:200 Species:Homo sapiens
Sequence 2:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster


Alignment Length:210 Identity:72/210 - (34%)
Similarity:119/210 - (56%) Gaps:18/210 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ-GKKIKLQIWDTAGQERF 71
            |.||.:|:|:..||||.::.|:.:|.||...:||:...|..:.:.|: |::.:|.||||||||||
  Fly    12 LNFKAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERF 76

Human    72 HTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGK 136
            |.:...||||:.|.:||||||:..||:.:..|:|.:.:....::..:::|||.|::::|.|...:
  Fly    77 HALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDE 141

Human   137 GEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP----------------NSENVD 185
            ..|.||..|.::.|||||.|..:.:.|..|.:.:|.:...::|                ||::.:
  Fly   142 ALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASPLRLQNPDTDNLNNSDDSE 206

Human   186 ISSGGGVTGWKSKCC 200
            ....|...|.:| ||
  Fly   207 APDPGDPAGQRS-CC 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB10NP_057215.3 Rab8_Rab10_Rab13_like 7..173 CDD:206659 64/165 (39%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 32..46 5/13 (38%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 64..81 11/16 (69%)
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 62/161 (39%)

Return to query results.
Submit another query.