DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RAB10 and Rab35

DIOPT Version :10

Sequence 1:NP_057215.3 Gene:RAB10 / 10890 HGNCID:9759 Length:200 Species:Homo sapiens
Sequence 2:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster


Alignment Length:204 Identity:98/204 - (48%)
Similarity:139/204 - (68%) Gaps:17/204 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70
            :|.|||||:||||||||:.:|.|||||.|:.::|:|||:||||:||:::|.::||||||||||||
  Fly     5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQER 69

Human    71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKG 135
            |.|||::||||..|:::|||:|||:||.|:.:||..|..:. :.|:::|:|||.|..|::||...
  Fly    70 FRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNC-DVVKKVLVGNKNDDPDRKVVITE 133

Human   136 KGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDI---------SSGGG 191
            ..::.|::..|..||||||.|||:|..||::...:|.......||.:..|.         |.|| 
  Fly   134 DAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLKPNPKGSKGG- 197

Human   192 VTGWKSKCC 200
                  |||
  Fly   198 ------KCC 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB10NP_057215.3 Rab8_Rab10_Rab13_like 7..173 CDD:206659 89/165 (54%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 32..46 6/13 (46%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 64..81 13/16 (81%)
Rab35NP_608373.1 Rab35 3..201 CDD:133310 98/204 (48%)

Return to query results.
Submit another query.