DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB10 and Rab27

DIOPT Version :10

Sequence 1:NP_057215.3 Gene:RAB10 / 10890 HGNCID:9759 Length:200 Species:Homo sapiens
Sequence 2:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster


Alignment Length:168 Identity:72/168 - (42%)
Similarity:113/168 - (67%) Gaps:5/168 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK----KIKLQIWDTAGQERF 71
            :.|::|||||||||:|::::|..|:|.||||:||||:.|.:....:    :|.||||||||||||
  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83

Human    72 HTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHA-NEDVERMLLGNKCDMDDKRVVPKG 135
            .::||::||.|||.:|::|:|:.|||...:.||..:..|| :||.:.:|.|||||:...|||.:.
  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQLRVVSRD 148

Human   136 KGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173
            :...:.|.:.:.:.||||....|:::|...|...::.:
  Fly   149 QVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMER 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB10NP_057215.3 Rab8_Rab10_Rab13_like 7..173 CDD:206659 72/166 (43%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 32..46 8/13 (62%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 64..81 11/16 (69%)
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 72/168 (43%)

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