DRSC/TRiP Functional Genomics Resources

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Protein Alignment MRPS30 and mRpS30

DIOPT Version :9

Sequence 1:NP_057724.2 Gene:MRPS30 / 10884 HGNCID:8769 Length:439 Species:Homo sapiens
Sequence 2:NP_001285297.1 Gene:mRpS30 / 32530 FlyBaseID:FBgn0030692 Length:557 Species:Drosophila melanogaster


Alignment Length:441 Identity:114/441 - (25%)
Similarity:177/441 - (40%) Gaps:75/441 - (17%)


- Green bases have known domain annotations that are detailed below.


Human    44 YPPIVASMTADSKAARLRRIERWQATVHAAESVDEKLRILTKMQFMKYMVY---PQTFALNADRW 105
            ||.|   .....||.:.:....|...:....:|:||:..:...::..:.|.   ......||...
  Fly    35 YPEI---QDLSFKARKQKDAANWHEEIRQVPTVEEKMIKINMPRYYGFKVVDFNDSKIPYNALPL 96

Human   106 YQYFTKTVFLSGLP---PPPAEPEPEPEPEPEPALD--LAALRAVACDCLLQEHFYLRRRRRVHR 165
            .|::|:|| |..||   ...|:.:...:.:.:|::|  ..|.|....|.|...|.|.:...:.|.
  Fly    97 TQHYTRTV-LEDLPSETDKKAQAKDSEQEQEQPSVDGLFKAARGDVIDALEFAHDYYKHLEKQHN 160

Human   166 YEES------EVISLPFLDQLVSTLVGLLSPHNPALAAAALDYRCPVHFYWVRGEEIIPRG---H 221
            ..||      .:::...::||...|:..||.....|....:||......:|..|....|:.   .
  Fly   161 SAESNPVERERILTQIIVEQLNRALLQSLSEEYKHLDELDVDYNPRHEAFWAVGGVDPPKNVQKS 225

Human   222 RRGR----------IDDLRYQIDDKPNNQIRISKQLAEFVPLDYSVPIEIPTIKCKPDKLPLFKR 276
            ::||          :|.: .|....|...:|..|||..:.....|..:|:      ..:||.||.
  Fly   226 KKGREWQKDMANESVDRM-VQYTGAPYLALRHRKQLTPWKTEAESENLEL------SKQLPRFKH 283

Human   277 QYENHIFVGSKTADPCCYGHT-------------------QFHLLPDKLRRERLLRQNC---ADQ 319
                         ||...|::                   .|.||..:.|....:|...   .||
  Fly   284 -------------DPRTLGYSTKHQHATNVPGYWPKGNENNFGLLSFQSRAHLQIRPKSFGEQDQ 335

Human   320 IEVVFRANAIASLFAWTGAQAMYQGFWSEADVTRPFVSQAVITDGKYFSFFCYQLNTLALTTQAD 384
            :|.: .:.||.|.:||..|||.|.||.:..::|.|..:|.|||:|:.:||:.||||||.|.....
  Fly   336 LEAL-HSLAIKSSYAWLLAQANYNGFNTYNELTYPMNTQTVITNGREWSFYEYQLNTLLLHGTNV 399

Human   385 QNNPRKNICWGTQSKPLYETIE-DNDVKGFNDDVLLQIVHFLLNRPKEEKS 434
            ..|||.|.|.||:..|||..|. ......|||:.|..:::|..|.|..::|
  Fly   400 AENPRVNFCRGTKPLPLYAEISASGKCVDFNDNALRHLLNFYANAPSIQRS 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPS30NP_057724.2 PDCD9 1..426 CDD:399848 111/431 (26%)
mRpS30NP_001285297.1 PDCD9 6..442 CDD:284543 111/431 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165140649
Domainoid 1 1.000 98 1.000 Domainoid score I7220
eggNOG 1 0.900 - - E1_KOG4461
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9607
Inparanoid 1 1.050 100 1.000 Inparanoid score I5007
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D239149at33208
OrthoFinder 1 1.000 - - FOG0006311
OrthoInspector 1 1.000 - - oto90743
orthoMCL 1 0.900 - - OOG6_108555
Panther 1 1.100 - - LDO PTHR13014
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3573
SonicParanoid 1 1.000 - - X5259
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.790

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