DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ZNF234 and salr

DIOPT Version :9

Sequence 1:NP_001138296.1 Gene:ZNF234 / 10780 HGNCID:13027 Length:700 Species:Homo sapiens
Sequence 2:NP_001245983.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster


Alignment Length:992 Identity:194/992 - (19%)
Similarity:319/992 - (32%) Gaps:365/992 - (36%)


- Green bases have known domain annotations that are detailed below.


Human    28 VQR-NLYQDVMLENFRNLL------SVGHHPFKHDVFLLEKEKKLDIMKTATQRKGKSADKIQSE 85
            ||| :|.|..::::.::.|      ::|.|  .|.    ::|::....:...:::..:..|.:.|
  Fly   152 VQRQHLMQLQLIQHLQSQLKRAEAAALGRH--SHS----DEEEEEPEPEPEPKKQPTNGLKEELE 210

Human    86 VETVPEAGRHEELYWGQIWKQIASDLIKYED---------SMISISRFPRQGDLSCQVRAGLYTT 141
            :|..||:.:.:|   .:..:...:|....||         ||:.        |:|..:.:.:.|.
  Fly   211 LEQGPESEQDQE---SRREENSKTDKRGTEDRKAEPEGYQSMMC--------DISSSLASSIITN 264

Human   142 H---TGQKFYQCDEYKKSFTDVFNFDLHQQLHSGEK-------------------SHTCDECGKS 184
            |   .......|.|..:..|:.......|.||:.:.                   .|.|..|||.
  Fly   265 HDPPPAPNEPNCLEMLQRRTEEVLDSASQSLHAAQMQEEYSEYASKEAQSRGEIFKHRCKYCGKI 329

Human   185 FCYISALHIHQRVHMGEKCYKCDVCGKEFSQSSHLQTHQRVHTVEKPFKCV---------ECGKG 240
            |...|||.||.|.|.||:.:.|:|||.:|:...:|:.|.:.||...|...:         ..|:|
  Fly   330 FGSYSALQIHLRSHTGERPFVCNVCGSKFTTKGNLKVHYQRHTQIFPPMLLPPGVAPNVGHSGQG 394

Human   241 FSRRSTLTVHCKLHSGEKPYNCEECGRAFIHASHLQEHQRIHTG---------EKPF-----KCD 291
            ..:.....:.........|...|:      |.:.::|.:.|...         .||.     |..
  Fly   395 QVQGEQYPIRLPFAPPVAPVGQEQ------HQNQVEEPEEIRQEIPVPQAEDLSKPMVKEKEKSH 453

Human   292 TCGKNFRRRSALNNHCMVHTGEKPYKCEDCGKCFTCSS--NLRIHQRVHTGEKPYKCEECGKCFI 354
            :..:..:....:.....:.:.|||.|  :..|....||  |..:.:|..:...|.: |:..:..:
  Fly   454 SPVERVKTPKEVKTDAALPSSEKPEK--EISKPVVTSSRRNGSVRKRQTSAVSPPQ-EDRERDLV 515

Human   355 ------------------QPSQFQAHRRIHTGEKPY-----VCKVCGKGFIYSSSFQAHQGVHTG 396
                              ||:::...:.....:|.:     :.|.       |.:.:..|.|...
  Fly   516 EHLHIAKLVRRSSASRESQPAEYSLAQMERIIDKSWEDLIEIDKT-------SETSKLQQLVDNI 573

Human   397 EK----PYKCNECGKSFRMKIHYQVHLVVHTGEKPYKCEVCGKAFRQSSYLKIHLKAHSVQKP-- 455
            |.    |.:|..|.|....:...|:|:..||||:|::|::||:||.....||.|:..|.::.|  
  Fly   574 ENKLTDPNQCIFCQKVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPPMR 638

Human   456 --FKCEECGQGFNQSSRLQIHQLIHT-----------GEKPYKCEECG---------KGFSRRAD 498
              |||..|.|.|:....||.|..|||           ...|.:.|..|         .|.|...|
  Fly   639 SQFKCPVCHQKFSNGIILQQHIRIHTMDDGSGGQGAPAANPGEAERLGIEDQNSNKSLGTSDTLD 703

Human   499 LKIHCRIHTGEK-------------------------------PYNCE---------------EC 517
            .......|:|::                               |:..|               :|
  Fly   704 FSTTISDHSGQRSESSQGGDFDEFMTMDSTDDSRDNSSAATATPHPLERERDREKERERRIPNDC 768

Human   518 GKVFSQASHLLTHQRVHSGEKPFK----------------------------------------- 541
            ....|.::..||..|..|||.|..                                         
  Fly   769 SDERSHSNPDLTGGRSESGEMPAMDLSSPSSNSGRIFATGLANGAAGGGSGNGGLPMLGMPMPPN 833

Human   542 ----------------------------------------CEECGKSFSRSAHLQAH-QKVH--- 562
                                                    |..|.|.....|.|::| |..|   
  Fly   834 LLLMAAAREEMHALGHAHAKFPLLPFGPLGFMGLHPPPNVCNLCFKMLPSLAALESHLQSEHAKE 898

Human   563 --TG--EKPYKCGECGK--GFKWSLNLDMHQR-------VHTGEK-------------------- 594
              ||  ::| :|.:.|.  |.|.:||.::..:       ..:|||                    
  Fly   899 PATGHAQRP-QCSDAGSPYGAKLTLNPNLFAKKPPSSSSSSSGEKLPESSNPPFPAENPPATPIK 962

Human   595 ----------------------------PYTCGECGK---------HFSQASSLQLHQSVHTGEK 622
                                        |...|:..:         |...||.|...|::.:...
  Fly   963 EDPDQEQLMVEEGASAGEGSGTGATSNYPQEAGDAEQSLMKMQLHAHRFPASPLDFQQALMSAGP 1027

Human   623 P-----------YKCDVCGKVFSRSSQLQYHRRVHTGEKPYKCEICGKRFSWRSNLVSHHKIHAA 676
            |           :.|.||.:.||.||.||.|.|.|||:||::|.:|.|.|:.:.||    |:| .
  Fly  1028 PTSSLDPPVNNKHFCHVCRRNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNL----KVH-M 1087

Human   677 GTFYENDENSKNIRELS 693
            ||....:..|:..|.:|
  Fly  1088 GTHMWTNPTSRRGRRMS 1104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF234NP_001138296.1 KRAB 8..65 CDD:214630 10/43 (23%)
KRAB 8..47 CDD:279668 6/25 (24%)
KRNB 91..147 11/67 (16%)
COG5048 <101..306 CDD:227381 50/258 (19%)
C2H2 Zn finger 150..170 CDD:275368 4/19 (21%)
C2H2 Zn finger 178..198 CDD:275368 11/19 (58%)
zf-C2H2 204..226 CDD:278523 7/21 (33%)
C2H2 Zn finger 206..226 CDD:275368 7/19 (37%)
zf-H2C2_2 218..243 CDD:290200 7/33 (21%)
C2H2 Zn finger 234..254 CDD:275368 2/28 (7%)
COG5048 258..672 CDD:227381 129/692 (19%)
C2H2 Zn finger 262..282 CDD:275368 3/19 (16%)
zf-H2C2_2 274..299 CDD:290200 5/38 (13%)
C2H2 Zn finger 290..310 CDD:275368 0/19 (0%)
C2H2 Zn finger 318..338 CDD:275368 5/21 (24%)
zf-H2C2_2 330..355 CDD:290200 4/42 (10%)
C2H2 Zn finger 346..366 CDD:275368 3/37 (8%)
zf-H2C2_2 359..383 CDD:290200 2/28 (7%)
C2H2 Zn finger 374..394 CDD:275368 3/19 (16%)
C2H2 Zn finger 402..422 CDD:275368 5/19 (26%)
zf-H2C2_2 414..439 CDD:290200 12/24 (50%)
C2H2 Zn finger 430..450 CDD:275368 8/19 (42%)
C2H2 Zn finger 458..478 CDD:275368 7/19 (37%)
zf-H2C2_2 471..495 CDD:290200 10/43 (23%)
C2H2 Zn finger 486..506 CDD:275368 5/28 (18%)
zf-H2C2_2 498..523 CDD:290200 6/70 (9%)
C2H2 Zn finger 514..534 CDD:275368 6/34 (18%)
zf-H2C2_2 526..551 CDD:290200 10/105 (10%)
C2H2 Zn finger 542..562 CDD:275368 7/20 (35%)
zf-H2C2_2 554..578 CDD:290200 10/33 (30%)
C2H2 Zn finger 570..590 CDD:275368 6/28 (21%)
zf-H2C2_2 582..607 CDD:290200 7/88 (8%)
C2H2 Zn finger 598..618 CDD:275368 6/28 (21%)
zf-H2C2_2 610..635 CDD:290200 7/35 (20%)
C2H2 Zn finger 626..646 CDD:275368 11/19 (58%)
zf-H2C2_2 639..662 CDD:290200 12/22 (55%)
C2H2 Zn finger 654..674 CDD:275368 7/19 (37%)
salrNP_001245983.1 zf-C2H2 321..343 CDD:278523 12/21 (57%)
C2H2 Zn finger 323..343 CDD:275368 11/19 (58%)
zf-H2C2_2 335..360 CDD:290200 13/24 (54%)
C2H2 Zn finger 351..371 CDD:275368 7/19 (37%)
C2H2 Zn finger 583..603 CDD:275368 5/19 (26%)
zf-H2C2_2 595..620 CDD:290200 12/24 (50%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
C2H2 Zn finger 643..663 CDD:275368 7/19 (37%)
lambda-1 1013..>1061 CDD:212564 15/47 (32%)
zf-C2H2 1040..1062 CDD:278523 11/21 (52%)
C2H2 Zn finger 1042..1062 CDD:275368 11/19 (58%)
zf-H2C2_2 1054..1079 CDD:290200 13/24 (54%)
C2H2 Zn finger 1070..1090 CDD:275368 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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