DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KIF1C and SMY1

DIOPT Version :10

Sequence 1:NP_006603.2 Gene:KIF1C / 10749 HGNCID:6317 Length:1103 Species:Homo sapiens
Sequence 2:NP_012844.1 Gene:SMY1 / 853783 SGDID:S000001562 Length:656 Species:Saccharomyces cerevisiae


Alignment Length:597 Identity:149/597 - (24%)
Similarity:244/597 - (40%) Gaps:134/597 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    39 NP--KQSKDAPKSFTFDYSYWSHTSTEDPQFASQQQVYRDIGEEMLLHAFEGYNVCIFAYGQTGA 101
            ||  :.:|:...:|.||..:.::.:.||.|......:..|:        ..|||..:..||.:.:
Yeast    62 NPLHETTKETHSTFQFDKVFDANATQEDVQKFLVHPIINDV--------LNGYNGTVITYGPSFS 118

Human   102 GKSYTMMGRQEPGQQGIVPQLCEDLFSRVSENQSAQ-LSYSVEVSYMEIYCERVRDLLNP-KSRG 164
            ||||:::|.:|  .:||:|.:|:.||..:.:|:..: .|:||.|...|||.|:..|||.| ..|.
Yeast   119 GKSYSLIGSKE--SEGILPNICKTLFDTLEKNEETKGDSFSVSVLAFEIYMEKTYDLLVPLPERK 181

Human   165 SLRV-REHPILGPYVQDLSKLAVTSYAD----------IADLMDCGNKARTVAATNMNETSSRSH 218
            .|:: |....:...::|:....|.||.|          :.:.|.||:|..          .||||
Yeast   182 PLKLHRSSSKMDLEIKDICPAHVGSYEDLRSYIQAVQNVGNRMACGDKTE----------RSRSH 236

Human   219 AVFTIVFTQRCHDQLTGLDSEKVSKISLVDLAGSERADSSGARGMRLKEGANINKSLTTLGKVIS 283
            .||.:...||....    |..|.|.:.||||.|:|:.|......:.......:|:|:..|...:.
Yeast   237 LVFQLHVEQRNRKD----DILKNSSLYLVDLHGAEKFDKRTESTLSQDALKKLNQSIEALKNTVR 297

Human   284 ALA----DMQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAA--LSPADINYEETLSTLRYA 342
            :|:    |.....:.|....||:|.||.:||::||||.:|.:|..  ||    |...|||||.:.
Yeast   298 SLSMKERDSAYSAKGSHSSAYRESQLTEVLKDSLGGNRKTKVILTCFLS----NVPTTLSTLEFG 358

Human   343 DRTKQIRCNAI---------------------INEDPNARLIRELQEEVARLREL---LMAQGLS 383
            |..:||. |.:                     |.:|.....|..|:.|:..|:.|   .:.:...
Yeast   359 DSIRQIN-NKVTDNTTGLNLKKKMDLFIQDMKIKDDNYVAQINILKAEIDSLKSLHNKSLPEDDE 422

Human   384 ASALEGLKTEEGSVRGALPAVSSPPAPVSPSSPTTHNGELEPSFSPNTESQIGPEEAMERLQETE 448
            ...||..|.|...::..|.:::.   .:|.|:....|..::             ||..|.|.:..
Yeast   423 KKMLENTKKENIKLKLQLDSITQ---LLSSSTNEDPNNRID-------------EEVSEILTKRC 471

Human   449 KIIAELNETWEEKLRKTEALRME------REALLAEMGVAVREDGGTVGVFSPKKTPHLVNLNE- 506
            :.||:|..:::.::.....|:.|      :|..|..|.|.:.|.               :.|.| 
Yeast   472 EQIAQLELSFDRQMNSNSKLQQELEYKKSKEEALESMNVRLLEQ---------------IQLQER 521

Human   507 ---DPLMSECLL-----YHIKDGVTRVGQVDMDIKLTGQFIREQHCLFRSIPQP--------DGE 555
               :.|.:..:|     .|.|...||..:    ||.....::|......:||.|        .|.
Yeast   522 EIQELLTTNAILKGELETHTKLTETRSER----IKSLESSVKELSLNKSAIPSPRRGSMSSSSGN 582

Human   556 VVVTLEPCEGAE 567
            .::.:|  ||:|
Yeast   583 TMLHIE--EGSE 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KIF1CNP_006603.2 KISc_KIF1A_KIF1B 4..355 CDD:276816 101/357 (28%)
Kinesin_assoc 352..522 CDD:465047 35/208 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..438 4/37 (11%)
FHA_KIF1C 498..599 CDD:438780 19/87 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 808..828
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 874..924
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 950..1103
SMY1NP_012844.1 KISc_KHC_KIF5 25..364 CDD:276820 98/329 (30%)
COG2433 <402..568 CDD:441980 37/200 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.