DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment STAG3 and stag1a

DIOPT Version :9

Sequence 1:XP_016867172.1 Gene:STAG3 / 10734 HGNCID:11356 Length:1239 Species:Homo sapiens
Sequence 2:NP_001349269.1 Gene:stag1a / 564533 ZFINID:ZDB-GENE-070912-448 Length:1258 Species:Danio rerio


Alignment Length:1255 Identity:601/1255 - (47%)
Similarity:826/1255 - (65%) Gaps:89/1255 - (7%)


- Green bases have known domain annotations that are detailed below.


Human    38 EGNGDSLLADEDT--------DFEDSLNRNVKKR--------AAKRPPKTTPVAKHPKKGSRVVH 86
            :..|||   .:||        :.:|..:..:||:        ||.:.|:.:|    .:||...|.
Zfish    10 QDTGDS---GQDTVSLSMSMSELDDPGDGKIKKKRGRPGRPPAANKKPRKSP----SEKGFMAVQ 67

Human    87 RH------SRKQSEPPANDLFNAVKAAKSDMQSLVDEWLDSYKQDQDAGFLELVNFFIQSCGCKG 145
            |.      |::..|.....||..||..||.|||:||:|::|||||:|...|:|:|||||..||||
Zfish    68 RGRKANGISQQNGEGDPVTLFEVVKQGKSAMQSVVDDWIESYKQDRDLALLDLINFFIQCSGCKG 132

Human   146 IVTPEMFKKMSNSEIIQHLTEQFNEDSGDYPLIAPGPSWKKFQGSFCEFVRTLVCQCQYSLLYDG 210
            .|..|||:.|.|:|||:.:||:|:||||||||...||.||||:.:||||:..|:.|||||::||.
Zfish   133 TVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTISGPLWKKFRYNFCEFICVLIRQCQYSIIYDE 197

Human   211 FPMDDLISLLTGLSDSQVRAFRHTSTLAAMKLMTSLVKVALQLSVHQDNNQRQYEAERNKGPGQR 275
            :.||.:||||||||||||||||||||||||||||:||.|||.||::|||.||||||||:|..|:|
Zfish   198 YMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINQDNTQRQYEAERSKIVGKR 262

Human   276 APERLESLLEKRKELQEHQEEIEGMMNALFRGVFVHRYRDVLPEIRAICIEEIGCWMQSYSTSFL 340
            |.|:||.||:|||||||:|:|||.|||::|:|:|||||||.:.|||||||||||.||:.||.:||
Zfish   263 ATEKLELLLQKRKELQENQDEIENMMNSIFKGIFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFL 327

Human   341 TDSYLKYIGWTLHDKHREVRLKCVKALKGLYGNRDLTTRLELFTSRFKDRMVSMVMDREYDVAVE 405
            .||||||:||||||:..||||||:|||:.||.||:|..:|||||:|||||:|||.:|:|||||||
Zfish   328 NDSYLKYVGWTLHDRQGEVRLKCLKALQNLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVE 392

Human   406 AVRLLILILKNMEGVLTDADCESVYPVVYASHRGLASAAGEFLYWKLFY---PECEIRMMGGREQ 467
            |:||:.|||:..|..|::.|||:||.:||::||.:|.||||||:.|||.   |:.| ..:..|..
Zfish   393 AIRLVTLILQGSEDALSNEDCENVYHLVYSAHRPVAVAAGEFLHRKLFSRHDPQAE-EALAKRRG 456

Human   468 RQSPGAQRTFFQLLLSFFVESELHDHAAYLVDSLWDCAGARLKDWEGLTSLLLEK----DQNLGD 528
            |.||..  ...::|:.||:|||||:||||||||||:.:...|||||.:|.||||:    ::.|.|
Zfish   457 RSSPNG--NLIRMLVLFFLESELHEHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEVLAD 519

Human   529 VQESTLIEILVSSARQASEGHPPVGRVTGRKGLTSKERKTQADDRVKLTEHLIPLLPQLLAKFSA 593
            .|||:|||:.|.:.|||:|.||||||.||::.||:||||.|.||:.|||||.|..||.||:|:..
Zfish   520 RQESSLIELTVCTIRQAAEAHPPVGRGTGKRVLTAKERKMQIDDKNKLTEHFIMALPMLLSKYQT 584

Human   594 DAEKVTPLLQLLSCFDLHIYCTGRLEKHLELFLQQLQEVVVKHAEPAVLEAGAHALYLLCNPEFT 658
            |:|||..|||:...|||.:|..||:||||:..|:|::.||.||.:..||||.:....:||:.|:|
Zfish   585 DSEKVANLLQIPQYFDLDVYSAGRMEKHLDALLKQIKFVVEKHTDTEVLEACSKTYSILCSEEYT 649

Human   659 FFSRADFARSQLVDLLTDRFQQELEELLQS-SFLDEDEVYNLAATLKRLSAFYNTHDLTRWELYE 722
            ..:|.|.|||||:|.|.|||...:|||||: ...|:|::||:.:|||||:||:|.||||||:.:.
Zfish   650 IMNRVDIARSQLIDELADRFNHSVEELLQAGEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDFFG 714

Human   723 PCCQLLQKAVDTGEVPHQVILPALTLVYFSILWTLTHISKSDASQKQLSSLRDRMVAFCELCQSC 787
            .|.:||:..::.|.:|.|:.:.||...::||||.|..|::...|:..|.:||..:.:|..:||.|
Zfish   715 NCYRLLRTGIEQGSMPEQIAVQALQCSHYSILWQLVKITEGAPSKDDLLALRRVVKSFLAICQQC 779

Human   788 LSDVDTEIQEQAFVLLSDLLLIFSPQMIVGGRDFLRPLVFFPEATLQSELASFLMDHVFIQPGDL 852
            ||:|:|.::||||:||.|||:|||.|:..|.|:.|:||||.|:.|||:||.:|::|||||...|.
Zfish   780 LSNVNTPVKEQAFMLLCDLLMIFSHQLTTGSREGLQPLVFIPDGTLQNELLNFILDHVFIDQDDE 844

Human   853 G---SGDSQEDHLQIERLHQRRRLLAGFCKLLLYGVLEMDAASDVFKHYNKFYNDYGDIIKETLT 914
            .   .||.:::..:||.||:||.|||.|.||::|.:::|.||:|:||||.|:||||||||||||:
Zfish   845 NQSIEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIIDMPAAADIFKHYMKYYNDYGDIIKETLS 909

Human   915 RARQIDRSHCSRILLLSLKQLYTELLQEHGPQGLNELPAFIE-MRDLARRFALSFGPQQLQNRDL 978
            :.||.|:..|::.|:|||:||:.||:|:.|| .|:...:.:. :::|||||||:||..|::.|:.
Zfish   910 KTRQTDKILCAKTLILSLQQLFNELIQDQGP-NLDRTSSHVSGIKELARRFALTFGLDQIKTREA 973

Human   979 VVMLHKEGIQFSLSELPPAGSSNQPPNLAFLELLSEFSPRLFHQDKQLLLSYLEKCL-QHVSQAP 1042
            |..|||:||:|:.....|.|:...||||||||:|.|||.:|..|||:.:.:||||.: :.:.:..
Zfish   974 VATLHKDGIEFAFKYQNPKGAEYPPPNLAFLEVLCEFSSKLLRQDKKTVHAYLEKFMTEQMMERR 1038

Human  1043 GHPWGPVTTYCHSL------SPVENTAETSPQVLPSSKRRRVEGPAKPNREDVSSSQ------EE 1095
            ...|.|:.:|.:||      ..:..|:.:|.....|.:.::...|....|.:..|.:      .:
Zfish  1039 EDIWLPLISYRNSLLTGGDEDRMSITSGSSSSKAGSIRSKKGRPPLHKKRIEEESMEGSWMMRND 1103

Human  1096 SLQLNSIPPTPTLTSTAVKS--RQPLWGLKEMEEEDGSELDFAQ---------GSQPVAGTERSR 1149
            |:|......||.||||.::.  ||....|.|.:.|.|||.|:..         |.|.:....|..
Zfish  1104 SIQTPGGLQTPQLTSTVLRENPRQAAEHLPEQDTEPGSESDYVHNPQMQMSWLGQQKMEEVNRKE 1168

Human  1150 FLGPQYFQTPHNPSGPGLGNQLMRLSLMEEDEEEELE---------IQDESNEERQDT---DMQA 1202
            .....|.:     :..|...|.:| .|||:|.|...|         ::|.| ||.:||   |:..
Zfish  1169 RTAMSYIK-----ARSGGVRQTVR-GLMEDDAEPIFEDVMMSSRGQLEDMS-EEFEDTMVIDLPP 1226

Human  1203 S-SYSSTSERGLDLLDSTEL 1221
            | :....:|...|..||..:
Zfish  1227 SRNRRERAELRPDFFDSAAM 1246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STAG3XP_016867172.1 None
stag1aNP_001349269.1 STAG 160..268 CDD:369917 76/107 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5537
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60131
OrthoDB 1 1.010 - - D167826at2759
OrthoFinder 1 1.000 - - FOG0000572
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101510
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3773
SonicParanoid 1 1.000 - - X570
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.760

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