DRSC/TRiP Functional Genomics Resources

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Protein Alignment Carns1 and Hao

DIOPT Version :10

Sequence 1:XP_036017269.1 Gene:Carns1 / 107239 MGIID:2147595 Length:1033 Species:Mus musculus
Sequence 2:NP_001027401.1 Gene:Hao / 3771779 FlyBaseID:FBgn0061356 Length:366 Species:Drosophila melanogaster


Alignment Length:150 Identity:38/150 - (25%)
Similarity:59/150 - (39%) Gaps:44/150 - (29%)


- Green bases have known domain annotations that are detailed below.


Mouse   440 AVVCRIQGDRPLLSKVVCGVGRGDRPVRHHYTLPRTLRVALAQCGLEEE--AQVALLEQGIKE-- 500
            |:|..|  |.|:.     |..|.|  ||::::||..|.:|..| |::..  ...|:...||.|  
  Fly   152 ALVLTI--DAPIF-----GHRRAD--VRNNFSLPSHLSLANFQ-GVKATGVGNAAMGASGINEYV 206

Mouse   501 ------------------------AAEGALA---AVLALE---AGLSVEQRGGRQVHTDFLGVDL 535
                                    ..:|.|.   ||||.|   |||.|...|.||:.|....::.
  Fly   207 SSQFDPTITWKDIAWLKGITHLPIVVKGVLTAEDAVLAQEFGCAGLIVSNHGARQIDTVPASIEA 271

Mouse   536 VLTVIGRTLTPVVLKLNSGL 555
            :..::......:|:.|:.|:
  Fly   272 LPEIVKAVGDNLVVMLDGGI 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Carns1XP_036017269.1 ATPgrasp_N 617..697 CDD:407962
AccC 658..934 CDD:440208
HaoNP_001027401.1 FMN_dh 16..359 CDD:426029 38/149 (26%)
Blue background indicates that the domain is not in the aligned region.

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