DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBR1 and byn

DIOPT Version :9

Sequence 1:NP_006584.1 Gene:TBR1 / 10716 HGNCID:11590 Length:682 Species:Homo sapiens
Sequence 2:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster


Alignment Length:640 Identity:175/640 - (27%)
Similarity:263/640 - (41%) Gaps:171/640 - (26%)


- Green bases have known domain annotations that are detailed below.


Human   128 GQHGPAHPAFSIGSPSRYMAHHPVITNGAYNSLLSNSSPQGYPTAGYPYPQQYGHSYQGAPFYQF 192
            |..|.|......||| :::.|              |....|:...|.......|.|..|...::.
  Fly    24 GGGGGAGGGAGSGSP-QHVTH--------------NGHGHGHGLGGVAAVSGGGASVSGNGGHRV 73

Human   193 --SSTQPGLVPGKAQVYLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNISGLDPTAHYNIFVD 255
              .:..|..:....::.|.:|.|||:|.....|||:||.||||||.:..:.|||||.|.|.:.::
  Fly    74 VGGAGSPNELDRNLRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLE 138

Human   256 VILADPNHWRFQGGKWVPCGKADTNVQGNRVYMHPDSPNTGAHWMRQEISFGKLKLTNNKGASNN 320
            .:..|.:.|::..|:|||.|||:. ...|.:|:||:|||.|||||::.|||.|:||||.   :|.
  Fly   139 FVQIDSHRWKYVNGEWVPGGKAEV-PPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNK---TNG 199

Human   321 NGQMVVLQSLHKYQPRLHVVEVNEDGTEDTSQPGRVQTFTFPETQFIAVTAYQNTDITQLKIDHN 385
            ||| ::|.|||||:||:|:|.|.       |:...|.|:.||||||||||||||.::|.|||.:|
  Fly   200 NGQ-IMLNSLHKYEPRVHLVRVG-------SEQRHVVTYPFPETQFIAVTAYQNEEVTSLKIKYN 256

Human   386 PFAKGF---RDNYDTIYTGCDMDRLTPSPNDSPRSQIVP------GARYAMAG----SFLQDQ-F 436
            ||||.|   ::..||:|           |:|:....::|      .|..|:|.    |..|.. .
  Fly   257 PFAKAFLDAKERPDTLY-----------PHDTHYGWLIPPPTHYTAAAAAVAAPPPLSIAQSHGL 310

Human   437 VSNYAKARFHPGAGAGPGPGTD--------------RSVPH----------TNGLLSPQQAEDPG 477
            |::..........|...|...|              |:.|:          :||......:..|.
  Fly   311 VASCPSVSSAESVGPSSGGSCDRYGRSLSSRSVAPTRTTPYSRPRVVSGSGSNGSAGNASSTSPQ 375

Human   478 APS-PQRWFVTPANNRLDFAASAYDTATDFAGNAATLL-------------------SYAAAGVK 522
            .|| ||    ||        .|.:.|:|   |:.:|.:                   |||.:|..
  Fly   376 PPSAPQ----TP--------TSLHSTST---GSVSTSVSSSSGGGIGSAPSTGCFSSSYAQSGFM 425

Human   523 AL-----------------------------PLQAAGCTGRPLGYYADPSGWGARSPPQYCGTKS 558
            ::                             |:....|:||.:..:..||.... ||.....:.|
  Fly   426 SVDASPTASVFSYPSSWQSNGNYWNATSVPGPMPMNVCSGRNISSHNSPSPTNG-SPSYTTSSPS 489

Human   559 GSVLPCWPNS---AAAAARMAGANPYLG---------EEAEGLAAER--SPLPPGAAEDAKPKDL 609
            .::....|:|   ..|...:.|....:|         :.|.|.||.:  .|.|.....     .|
  Fly   490 YTIHHLTPHSHQYNMAQTDIYGTGVGVGGGAGTTGSPQAAYGAAAHQVYHPTPTSPTH-----QL 549

Human   610 SDSSWIETPSSIKSIDS-------SDSGIYEQAKRRRISPADTP--VSESSSPLK 655
            ..::.:..||::....|       ::.|:|:.|......|...|  :..::.||:
  Fly   550 YTNAVLNAPSALSYSASGWHNGSGAEYGLYQNAAAAYYQPEYIPLEIGYATHPLE 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBR1NP_006584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..83
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..127
T-box_TBR1 203..393 CDD:410330 95/192 (49%)
T-box_assoc 418..680 CDD:406561 61/345 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 447..483 11/60 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 588..658 16/79 (20%)
bynNP_524031.2 TBOX 86..268 CDD:238106 95/193 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.