DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBR1 and Doc1

DIOPT Version :9

Sequence 1:NP_006584.1 Gene:TBR1 / 10716 HGNCID:11590 Length:682 Species:Homo sapiens
Sequence 2:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster


Alignment Length:472 Identity:146/472 - (30%)
Similarity:198/472 - (41%) Gaps:133/472 - (28%)


- Green bases have known domain annotations that are detailed below.


Human   146 MAHHPVITNGAYNSLLSNSSPQGYPTAGYPY--PQQYGHSYQGAPFYQFSSTQPGLVPGKAQVYL 208
            :||.      .|...:....|..:|:. .|:  |.|..|        ....::|.| || .:..|
  Fly    16 LAHE------IYRQQIMQRIPDPFPSM-LPFNMPHQQPH--------MMLPSRPTL-PG-VEAKL 63

Human   209 CNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNISGLDPTAHYNIFVDVILADPNHWRFQGGKWVP 273
            .|..||.:||:..|||||||.||||||.:..::|||:..|.|.:.::::......::|.|.:|||
  Fly    64 ENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVP 128

Human   274 CGKADTNVQGNRVYMHPDSPNTGAHWMRQEISFGKLKLTNNKGASNNNGQMVVLQSLHKYQPRLH 338
            .|.|:.. ...|:|:|||||.|||||..|.:.|.|:|||||...|:.:   :||.|:||||||||
  Fly   129 AGGAEPQ-SPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGH---IVLASMHKYQPRLH 189

Human   339 VVEVNEDGTEDTSQP-GRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPFAKGFRDNYDTIYTGC 402
            ::.    .:|.|..| ...|.|.||||:|:|||||||..||:||||:||||||||::        
  Fly   190 IIR----SSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRES-------- 242

Human   403 DMDRLTPSPNDSPRSQIVPGARYAMAGSFLQDQFVSNYAKARFHPGAGAGPGPGTDRSVPHTNGL 467
            ...|.....|.|..|.:                                                
  Fly   243 GQSRCKRKLNSSGNSTL------------------------------------------------ 259

Human   468 LSPQQAEDPGA-----PSPQRWFVTPANNRLDF-------AASAYDTATDFAGNAAT-----LLS 515
                ::||.|:     .|||     ....|.||       .:.||..||....|..:     .||
  Fly   260 ----ESEDDGSSVSSCDSPQ-----AKRQRQDFEQDSTGSVSPAYYGATHPVANPMSPYLRHHLS 315

Human   516 YAAAGVKALPLQAAGCTGRPLGYYADPSGWGARSPPQYCGTKSGSVLPCWPNSAAAAARMAGANP 580
            |..:|...||...|.      .|:..       .|||        :||..|  |..|..:|..:|
  Fly   316 YGPSGAAGLPPSIAA------AYFGG-------VPPQ--------ILPMPP--ATYAPTVAPVSP 357

Human   581 YLGEEAEGLAAERSPLP 597
            ...:.........||.|
  Fly   358 VASQPVGSSTPTTSPRP 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBR1NP_006584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..83
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..127
T-box_TBR1 203..393 CDD:410330 93/190 (49%)
T-box_assoc 418..680 CDD:406561 35/197 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 447..483 5/40 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 588..658 3/10 (30%)
Doc1NP_648283.1 TBOX 58..245 CDD:238106 95/203 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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