DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CETN3 and Cetn3

DIOPT Version :9

Sequence 1:NP_001284694.1 Gene:CETN3 / 1070 HGNCID:1868 Length:191 Species:Homo sapiens
Sequence 2:XP_006517137.1 Gene:Cetn3 / 12626 MGIID:1097706 Length:183 Species:Mus musculus


Alignment Length:171 Identity:155/171 - (90%)
Similarity:159/171 - (92%) Gaps:3/171 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSLALRSELVVDKTKRKKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKAD 65
            ||||||.|||||||||||||||||||||||||||||||||||:||||||||||||||||||||||
Mouse     1 MSLALRGELVVDKTKRKKRRELSEEQKQEIKDAFELFDTDKDQAIDYHELKVAMRALGFDVKKAD 65

Human    66 VLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVAREL 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse    66 VLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVAREL 130

Human   131 GENMSDEELRAMIEEFDKDGDGEILKNILLLPIWSRCLSLN 171
            |||||||||||||||||||||||..:....|   .:|.||:
Mouse   131 GENMSDEELRAMIEEFDKDGDGERSREPTCL---LKCFSLS 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CETN3NP_001284694.1 PTZ00183 15..190 CDD:185503 142/157 (90%)
Cetn3XP_006517137.1 PTZ00183 15..157 CDD:185503 138/141 (98%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83968621
Domainoid 1 1.000 127 1.000 Domainoid score I38981
eggNOG 1 0.900 - - E2759_KOG0028
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H74521
Inparanoid 1 1.050 326 1.000 Inparanoid score I14792
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG53747
OrthoDB 1 1.010 - - D512630at33208
OrthoFinder 1 1.000 - - FOG0000932
OrthoInspector 1 1.000 - - oto116591
orthoMCL 1 0.900 - - OOG6_104526
Panther 1 1.100 - - LDO PTHR23050
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R179
SonicParanoid 1 1.000 - - X601
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1919.300

Return to query results.
Submit another query.