DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CORIN and fz2

DIOPT Version :9

Sequence 1:NP_006578.2 Gene:CORIN / 10699 HGNCID:19012 Length:1042 Species:Homo sapiens
Sequence 2:NP_001262037.1 Gene:fz2 / 40090 FlyBaseID:FBgn0016797 Length:806 Species:Drosophila melanogaster


Alignment Length:399 Identity:93/399 - (23%)
Similarity:140/399 - (35%) Gaps:125/399 - (31%)


- Green bases have known domain annotations that are detailed below.


Human   444 DPNNSLNNCSQCEPITLELCMNLPYNSTSYPNYFGHRTQKEASISWESSLFPALVQTNCYKYLMF 508
            |||      .:||.||:.:|..:.||.||:||...|.||.||.:  |...|..||:..|...|.|
  Fly    59 DPN------LRCEEITIPMCRGIGYNMTSFPNEMNHETQDEAGL--EVHQFWPLVEIKCSPDLKF 115

Human   509 FSCTILVPKCDVNTGEHIPPCRALCEHSKERCESVLGIVGLQWPEDTDCSQFPEENSDNQTCLMP 573
            |.|::..|.|..:..:.:|.||::||.::..|..::.....:|||...|...|.....:..|:..
  Fly   116 FLCSMYTPICLEDYHKPLPVCRSVCERARSGCAPIMQQYSFEWPERMACEHLPLHGDPDNLCMEQ 180

Human   574 DEYVE--------------ECSPSHFKCRSG------------QCVLASRRCDGQ--ADCDDDSD 610
            ..|.|              ..|.|..|.:.|            ....:::.|.|:  .:|.:...
  Fly   181 PSYTEAGSGGSSGGSGGSGSGSGSGGKRKQGGSGSGGSGAGGSSGSTSTKPCRGRNSKNCQNPQG 245

Human   611 EE------NCGCK-------ERDLWECPSNKQCLKH--------TV-ICDGFPDC--PDYMDEKN 651
            |:      :|.|:       :..|.:..|....:.|        || ...|.|:|  |       
  Fly   246 EKASGKECSCSCRSPLIFLGKEQLLQQQSQMPMMHHPHHWYMNLTVQRIAGVPNCGIP------- 303

Human   652 CS--FCQDDELECANHACVSRDLWC---DGEADCS----------DSS----DEWDCVTLS---- 693
            |.  |..:||.:.|.       ||.   .|...||          |:.    .|...|.||    
  Fly   304 CKGPFFSNDEKDFAG-------LWIALWSGLCFCSTLMTLTTFIIDTERFKYPERPIVFLSACYF 361

Human   694 ---INVNSSSF----------LMVHRAATEHHVC-------------ADGWQEILSQLACKQMGL 732
               :...|.:|          |::..::|..|.|             :..|..|||.......||
  Fly   362 MVAVGYLSRNFLQNEEIACDGLLLRESSTGPHSCTLVFLLTYFFGMASSIWWVILSFTWFLAAGL 426

Human   733 --GEPSVTK 739
              |..::||
  Fly   427 KWGNEAITK 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CORINNP_006578.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
DDNN motif 26..29
CRD_corin_1 135..263 CDD:143554
LDLa 269..304 CDD:238060
LDLa 306..340 CDD:238060
Ldl_recept_a 347..377 CDD:278486
LDLa 387..414 CDD:238060
CRD_corin_2 454..575 CDD:143579 39/120 (33%)
LDLa 580..614 CDD:238060 8/53 (15%)
LDLa 655..689 CDD:238060 10/50 (20%)
SR 690..786 CDD:214555 18/82 (22%)
Tryp_SPc 801..1030 CDD:214473
Tryp_SPc 802..1033 CDD:238113
fz2NP_001262037.1 CRD_FZ5_like 63..182 CDD:143565 39/120 (33%)
Frizzled 308..618 CDD:279827 29/135 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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