DRSC/TRiP Functional Genomics Resources

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Protein Alignment DLL3 and shf

DIOPT Version :9

Sequence 1:NP_058637.1 Gene:DLL3 / 10683 HGNCID:2909 Length:618 Species:Homo sapiens
Sequence 2:NP_001284963.1 Gene:shf / 31617 FlyBaseID:FBgn0003390 Length:460 Species:Drosophila melanogaster


Alignment Length:364 Identity:99/364 - (27%)
Similarity:131/364 - (35%) Gaps:133/364 - (36%)


- Green bases have known domain annotations that are detailed below.


Human   117 PGTFSFIIETWREELGDQIGGPAWSLLARVAGRRR---------------LAAGGPWARDIQRAG 166
            |...:::..||:                  :|||:               |.|.....|...|..
  Fly   166 PSEVNYVNFTWK------------------SGRRKYFYDFDRLQTMDESILKAPTLSIRKSGRIP 212

Human   167 AWELRFSYRARCEPPAVGTAC--------TRLCRPRS-APSRCGPGLRPCAPLEDEC-------- 214
            ..:..||....|...:.|||.        ||..:|.| .|.|..        .:.||        
  Fly   213 QEQKNFSIFLPCTGNSSGTASFNVGLKIQTRHNKPLSGTPIRLN--------FKKECAHRGVYDI 269

Human   215 -----------EAP-LVCRAGCSPEHGFCEQPGECRCLEGWTGPLCTVPVSTSSCLSPRGPSSAT 267
                       :|| ..|...|. ::|:|.:...|:|..|:||..|    .|:.|. |:      
  Fly   270 DASNPTSLTTLQAPDPECSLKCG-KNGYCNEHHICKCNVGYTGQYC----ETAFCF-PQ------ 322

Human   268 TGCLVPGPGPCDGNPCANGGSCSETPRSFECTCPRGFYGLRCEVSGVTCADGPCFNGGLCVGGAD 332
                           |.|||:|:...   .||||.|:.|.:||  |..|.| .|.|||.|:   .
  Fly   323 ---------------CLNGGNCTAPS---VCTCPEGYQGTQCE--GGICKD-KCLNGGKCI---Q 363

Human   333 PDSAYICHCPPGFQGSNCEKRVDRCSLQPCRNGGLCLDLGHALRCRCRAGFAGPRCEHDLDDCAG 397
            .|.   |.|..|:.|..||  ..:|.: ||:|.|.|  :|:.| |||..|..|..||      .|
  Fly   364 KDK---CQCSKGYYGLRCE--YSKCVI-PCKNEGRC--IGNNL-CRCPNGLRGDHCE------IG 413

Human   398 R------ACANGGTCVEGGGAHR-CSCALGFGGRDCRER 429
            |      .|.| ||||    :|: |.|..||.||.|..|
  Fly   414 RKQRSICKCRN-GTCV----SHKHCKCHPGFYGRHCNGR 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DLL3NP_058637.1 MNNL 27..84 CDD:284966
DSL 158..248 CDD:302925 27/118 (23%)
EGF_CA 279..310 CDD:238011 11/30 (37%)
EGF 316..349 CDD:278437 12/32 (38%)
EGF_CA 354..389 CDD:238011 13/34 (38%)
EGF_CA 391..426 CDD:238011 15/41 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 546..566
shfNP_001284963.1 WIF 137..258 CDD:280237 22/117 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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