DRSC/TRiP Functional Genomics Resources

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Protein Alignment CTCF and ztf-16

DIOPT Version :10

Sequence 1:NP_006556.1 Gene:CTCF / 10664 HGNCID:13723 Length:727 Species:Homo sapiens
Sequence 2:NP_001024851.1 Gene:ztf-16 / 180756 WormBaseID:WBGene00019960 Length:480 Species:Caenorhabditis elegans


Alignment Length:484 Identity:91/484 - (18%)
Similarity:156/484 - (32%) Gaps:138/484 - (28%)


- Green bases have known domain annotations that are detailed below.


Human   268 CELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTL-----LRNHLNTHTGTRPH---KC 324
            |..|.:|....|....|::.|.:|  |.....|....:.|:     :::...:...|.|.   ..
 Worm     7 CTECGFTTTVFSEFQGHIEKHENE--HSRSSSGEMSNSQTIEWGDGIQSSTPSPRSTPPSDPTPS 69

Human   325 PDCDMAF---VTSGELVRHRRYKHTHEKPFK----CSMCDYASVEVSKLKRHIRSHTGER----P 378
            ||.|...   ::..|:......|....|..|    |..|::.:.....:|.|:.:|  ||    .
 Worm    70 PDSDEHLEHHISITEITNTLIKKEPGTKGQKTVHVCPHCNFTTCMSQHMKSHLEAH--ERHQGQM 132

Human   379 FQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCP--H 441
            :||.:|.........:.||...|||.|||||..|..||.:...|:.|.: .|.:....|.||  .
 Worm   133 YQCDICKMQFSQKANMHRHRMRHSGVKPYECRFCKKRFFRKDQMQEHSM-THIKTGFGFDCPVSQ 196

Human   442 CDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQ 506
            |:...::.:.|..||.:.|                                              
 Worm   197 CNMQFSQHNALRAHLEETH---------------------------------------------- 215

Human   507 ERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMA 571
                     |.:...|.:|..|:..|...:.|.:||:                           .
 Worm   216 ---------TISSTNPASCKRCNLMFANSRRLLLHFQ---------------------------T 244

Human   572 RHADNCAGPDGVEGENGGETKKSKRGRKRKMRSKKEDSSD-------SENAEPDLDDNEDEEEPA 629
            ||.|:.:.|   :.||..:.||...|....|.......::       ||.:.|:.|.:::  ..:
 Worm   245 RHDDSESSP---KKENTPKRKKLSNGNALPMDPANMSITEQLQRMVKSEFSPPNTDTSDN--STS 304

Human   630 VEIEPEPEPQPVTPAPPPAKKRRGRPPGRTNQPKQNQPTAIIQVEDQNTGAIENI--IVEVKKEP 692
            .|.:..|...|:  |.|...........:.|...:|.|..::.:.:....|:.||  :..:.|:.
 Worm   305 SEFDKIPPSFPM--ANPDILLMCLNQMNQFNGFGENIPRPMLNIPNIPLPALHNIPAVAAIVKQD 367

Human   693 DAE--------------PAEGEEEEAQPA 707
            ..:              |:..|:..:.||
 Worm   368 QVQLWSEQTSSSVSVSAPSPSEQSHSPPA 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTCFNP_006556.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..211
zf-H2C2_5 266..289 CDD:404746 5/20 (25%)
C2H2 Zn finger 268..288 CDD:275368 5/19 (26%)
zf-H2C2_2 280..305 CDD:463886 5/24 (21%)
C2H2 Zn finger 296..316 CDD:275368 2/24 (8%)
zf-H2C2_2 309..333 CDD:463886 5/29 (17%)
C2H2 Zn finger 324..347 CDD:275368 5/25 (20%)
zf-H2C2_5 351..375 CDD:404746 6/27 (22%)
C2H2 Zn finger 353..373 CDD:275368 4/19 (21%)
COG5048 <366..500 CDD:227381 32/139 (23%)
C2H2 Zn finger 381..401 CDD:275368 4/19 (21%)
C2H2 Zn finger 409..426 CDD:275368 5/16 (31%)
C2H2 Zn finger 439..457 CDD:275368 5/19 (26%)
C2H2 Zn finger 469..489 CDD:275368 0/19 (0%)
C2H2 Zn finger 497..517 CDD:275368 0/19 (0%)
zf-H2C2_2 509..534 CDD:463886 5/24 (21%)
C2H2 Zn finger 525..546 CDD:275368 6/20 (30%)
C2H2 Zn finger 557..573 CDD:275368 0/15 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 573..677 21/110 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 689..717 5/33 (15%)
ztf-16NP_001024851.1 C2H2 Zn finger 105..125 CDD:275368 4/19 (21%)
C2H2 Zn finger 135..155 CDD:275368 4/19 (21%)
C2H2 Zn finger 163..183 CDD:275368 6/20 (30%)
C2H2 Zn finger 225..246 CDD:275368 6/47 (13%)
Blue background indicates that the domain is not in the aligned region.

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