DRSC/TRiP Functional Genomics Resources

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Protein Alignment CELF1 and NGR1

DIOPT Version :10

Sequence 1:NP_001317201.1 Gene:CELF1 / 10658 HGNCID:2549 Length:514 Species:Homo sapiens
Sequence 2:NP_009771.3 Gene:NGR1 / 852513 SGDID:S000000416 Length:672 Species:Saccharomyces cerevisiae


Alignment Length:470 Identity:90/470 - (19%)
Similarity:155/470 - (32%) Gaps:184/470 - (39%)


- Green bases have known domain annotations that are detailed below.


Human    77 DRSQNPPQSKGCCFVTFYTRKAALEAQNALH-NMKVLPGMHHPIQMKPADSEKN----------- 129
            |.|.......|.|||.|.|:|   :|:.||. |...||..:.|    ..:|:.|           
Yeast   119 DPSTTQLHHAGYCFVEFETQK---DAKFALSLNATPLPNFYSP----TTNSQTNPTFKRTFRLNW 176

Human   130 ----------NAVEDRKLFIGMISKKCTENDIRVMFSS-FGQIEECRILRGP-DGLSRGCAFVTF 182
                      .:..:..||:|.:|...||.|:..:|.: |..::..|::..| .|.||...||.|
Yeast   177 ASGATLQSSIPSTPEFSLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRF 241

Human   183 TTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD-----KEQKRMAQQLQQQMQQISAASVWG 242
            ......:.|:..| ..:..:|  ..:.|.:|..:.:     :||::..||||||.||:...    
Yeast   242 GDEDERRRALIEM-SGKWFQG--RALRVAYATPRNNMMLQLQEQQQQQQQLQQQHQQLDQE---- 299

Human   243 NLAGLNTLGPQYLALYLQLLQQTASSGNLNTLSSLHPM----GGLNAMQLQNLAALAAAASAAQN 303
                 :..||..:.....|:|..::...||.|.:..||    ||::.|::.:            :
Yeast   300 -----DNNGPLLIKTANNLIQNNSNMLPLNALHNAPPMHLNEGGISNMRVND------------S 347

Human   304 TPSGTNALTTSSSPLSVLTSSAGSSPSSSSSNSVNPIASLGALQTLAGATAGLNVGSLAGMAALN 368
            .||.|                                                            
Yeast   348 LPSNT------------------------------------------------------------ 352

Human   369 GGLGSSGLSNGTGSTMEALTQAYSGIQQYAAAALPTLYNQNLLTQQSIGAAGSQKEGPEGANLFI 433
                                                 ||.:                |....:|:
Yeast   353 -------------------------------------YNTD----------------PTNTTVFV 364

Human   434 YHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMK 498
            ..|..:..:..|..:|.|||.:::.::     .|...| |||.::..:.|:|:||.:.||.:|..
Yeast   365 GGLVPKTTEFQLRSLFKPFGPILNVRI-----PNGKNC-GFVKFEKRIDAEASIQGLQGFIVGGS 423

Human   499 RLKVQLKR-SKNDSK 512
            .:::...| |.:::|
Yeast   424 PIRLSWGRPSSSNAK 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CELF1NP_001317201.1 RRM1_CELF1_2_Bruno 42..125 CDD:410040 16/48 (33%)
RRM2_CELF1_2 134..214 CDD:410042 21/81 (26%)
RRM3_CELF1_2 422..513 CDD:241082 23/92 (25%)
NGR1NP_009771.3 RRM1_NGR1_NAM8_like 35..180 CDD:410023 18/67 (27%)
RRM2_NGR1_NAM8_like 191..270 CDD:410025 21/81 (26%)
RRM3_NGR1_NAM8_like 359..430 CDD:409782 19/76 (25%)

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