DRSC/TRiP Functional Genomics Resources

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Protein Alignment CELF1 and GBP2

DIOPT Version :10

Sequence 1:NP_001317201.1 Gene:CELF1 / 10658 HGNCID:2549 Length:514 Species:Homo sapiens
Sequence 2:NP_009916.1 Gene:GBP2 / 850346 SGDID:S000000517 Length:427 Species:Saccharomyces cerevisiae


Alignment Length:398 Identity:69/398 - (17%)
Similarity:126/398 - (31%) Gaps:102/398 - (25%)


- Green bases have known domain annotations that are detailed below.


Human   125 DSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQ 189
            |:.|.|.  :..:|:..::..||..|::.:|.:.|::.|..|:.. .|..||...|.||.....|
Yeast   114 DATKRNF--ENSIFVRNLTFDCTPEDLKELFGTVGEVVEADIITS-KGHHRGMGTVEFTKNESVQ 175

Human   190 TAIKAMHQAQTMEGCSSPMVVKF----ADTQKDKEQKRMAQQLQQQMQ----QISAASVWGNLAG 246
            .||.....|..|:   ..::|:.    .:..|:..:|...:::....:    .:..:..|.:|..
Yeast   176 DAISKFDGALFMD---RKLMVRQDNPPPEAAKEFSKKATREEIDNGFEVFIINLPYSMNWQSLKD 237

Human   247 LNTLGPQYLALYLQLLQQTASSGNLNTL-----SSLHPMGGLNAMQLQNLAALAAAASAAQNTPS 306
            :.......|...::|.....|.|..:.:     ..:..:...|.|:::  ..:........|...
Yeast   238 MFKECGHVLRADVELDFNGFSRGFGSVIYPTEDEMIRAIDTFNGMEVE--GRVLEVREGRFNKRK 300

Human   307 GTNALTTSSSPLSVLTSSAGSSPSSSSSNSVNPIASLGALQTLAGATAGLNVGSLAGMAALNGGL 371
            ..:........|.   .:.|:.|..:..      |::...:|.|..|.|:|.|.           
Yeast   301 NNDRYNQRREDLE---DTRGTEPGLAQD------AAVHIDETAAKFTEGVNPGG----------- 345

Human   372 GSSGLSNGTGSTMEALTQAYSGIQQYAAAALPTLYNQNLLTQQSIGAAGSQKEGPEGANLFIY-- 434
                                                                    ..|.|||  
Yeast   346 --------------------------------------------------------DRNCFIYCS 354

Human   435 HLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKC-FGFVSYDNPVSAQAAIQSMNGFQIGMK 498
            :||......||..:|.|.|.:.:|:  :..|.|.... ...|.|:|.|.|...||.:|.:..|..
Yeast   355 NLPFSTARSDLFDLFGPIGKINNAE--LKPQENGQPTGVAVVEYENLVDADFCIQKLNNYNYGGC 417

Human   499 RLKVQLKR 506
            .|::...|
Yeast   418 SLQISYAR 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CELF1NP_001317201.1 RRM1_CELF1_2_Bruno 42..125 CDD:410040 69/398 (17%)
RRM2_CELF1_2 134..214 CDD:410042 20/83 (24%)
RRM3_CELF1_2 422..513 CDD:241082 25/88 (28%)
GBP2NP_009916.1 RRM1_HRB1_GBP2 121..197 CDD:410184 20/79 (25%)
RRM2_HRB1_GBP2 218..292 CDD:410185 8/75 (11%)
RRM3_HRB1_GBP2 347..425 CDD:410186 24/79 (30%)

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