DRSC/TRiP Functional Genomics Resources

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Protein Alignment CELF1 and Celf1

DIOPT Version :10

Sequence 1:NP_001317201.1 Gene:CELF1 / 10658 HGNCID:2549 Length:514 Species:Homo sapiens
Sequence 2:NP_001421245.1 Gene:Celf1 / 362160 RGDID:1307721 Length:514 Species:Rattus norvegicus


Alignment Length:514 Identity:511/514 - (99%)
Similarity:513/514 - (99%) Gaps:0/514 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAAFKLDFLPEMMVDHCSLNSSPVSKKMNGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQ 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MAAFKLDFLPEMMVDHCSLNSSPVSKKMNGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQ 65

Human    66 YGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNN 130
            ||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 YGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNN 130

Human   131 AVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAM 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
  Rat   131 AVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAM 195

Human   196 HQAQTMEGCSSPMVVKFADTQKDKEQKRMAQQLQQQMQQISAASVWGNLAGLNTLGPQYLALYLQ 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 HQAQTMEGCSSPMVVKFADTQKDKEQKRMAQQLQQQMQQISAASVWGNLAGLNTLGPQYLALYLQ 260

Human   261 LLQQTASSGNLNTLSSLHPMGGLNAMQLQNLAALAAAASAAQNTPSGTNALTTSSSPLSVLTSSA 325
            ||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 LLQQTANSGNLNTLSSLHPMGGLNAMQLQNLAALAAAASAAQNTPSGTNALTTSSSPLSVLTSSA 325

Human   326 GSSPSSSSSNSVNPIASLGALQTLAGATAGLNVGSLAGMAALNGGLGSSGLSNGTGSTMEALTQA 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   326 GSSPSSSSSNSVNPIASLGALQTLAGATAGLNVGSLAGMAALNGGLGSSGLSNGTGSTMEALTQA 390

Human   391 YSGIQQYAAAALPTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNV 455
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   391 YSGIQQYAAAALPTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNV 455

Human   456 VSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 514
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   456 VSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CELF1NP_001317201.1 RRM1_CELF1_2_Bruno 42..125 CDD:410040 81/82 (99%)
RRM2_CELF1_2 134..214 CDD:410042 78/79 (99%)
RRM3_CELF1_2 422..513 CDD:241082 90/90 (100%)
Celf1NP_001421245.1 RRM1_CELF1_2_Bruno 42..125 CDD:410040 81/82 (99%)
RRM2_CELF1_2 134..214 CDD:410042 78/79 (99%)
RRM3_CELF1_2 422..513 CDD:241082 90/90 (100%)

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