DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IGF2BP3 and igf2bp3

DIOPT Version :10

Sequence 1:XP_047275738.1 Gene:IGF2BP3 / 10643 HGNCID:28868 Length:634 Species:Homo sapiens
Sequence 2:NP_001017139.1 Gene:igf2bp3 / 549893 XenbaseID:XB-GENE-483018 Length:594 Species:Xenopus tropicalis


Alignment Length:536 Identity:446/536 - (83%)
Similarity:481/536 - (89%) Gaps:15/536 - (2%)


- Green bases have known domain annotations that are detailed below.


Human   114 GKIELHGKPIEVEHSVPKRQRIRKLQIRNIPPHLQWEVLDSLLVQYGVVESCEQVNTDSETAVVN 178
            ||:|||||.||||||||||||.|||||||||||||||||||||.|||.||:||||||||||||||
 Frog    59 GKVELHGKVIEVEHSVPKRQRSRKLQIRNIPPHLQWEVLDSLLAQYGTVENCEQVNTDSETAVVN 123

Human   179 VTYSSKDQARQALDKLNGFQLENFTLKVAYIPDEMAAQQNPLQQ---------PRGRRGLGQRGS 234
            |||::|:.|||.|:||||:||||::|||.|||||||.||.|.||         |:||||.||||.
 Frog   124 VTYANKEHARQGLEKLNGYQLENYSLKVTYIPDEMATQQAPSQQLQQQPQQQHPQGRRGFGQRGP 188

Human   235 SRQGSPGSVSKQKP-CDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKS 298
            :||||||:.::.|| .::|||:||||||||||||||||||||||||||||||:|||||||||||.
 Frog   189 ARQGSPGAAARPKPQSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKP 253

Human   299 ITILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 363
            |||.|||||.|||||.|:|||.|||||.|||||||||||||||||||||||||||||||||||||
 Frog   254 ITIHSTPEGCSAACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 318

Human   364 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNAL 428
            ||||||||:||||||||||||||::|.|||||||||||||||||||||:||||||||||||||||
 Frog   319 KITISPLQDLTLYNPERTITVKGSIEACAKAEEEIMKKIRESYENDIAAMNLQAHLIPGLNLNAL 383

Human   429 GLFPP-TSGMPPPTSGPPSAMT-PPYPQF-EQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFA 490
            ||||| :||||||:.|.||..| ..||.| :|.|:||||||||||:|||||||||||||||||||
 Frog   384 GLFPPSSSGMPPPSVGVPSPTTSTSYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFA 448

Human   491 GASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAG 555
            ||||||||||.||||:||||||||||||||||||||||:|||||..|||||||||||:|||:|||
 Frog   449 GASIKIAPAEGPDAKLRMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAG 513

Human   556 RVIGKGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKITGHFYACQVAQRKIQEILTQVK--QH 618
            ||||||||||||||||:||||||||||||||||||||||||||||.|:|||||||||.||:  |.
 Frog   514 RVIGKGGKTVNELQNLTSAEVVVPRDQTPDENDQVVVKITGHFYASQLAQRKIQEILAQVRRQQQ 578

Human   619 QQQKALQSGPPQSRRK 634
            ||||..|||.||.|||
 Frog   579 QQQKTAQSGQPQPRRK 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IGF2BP3XP_047275738.1 RRM_SF <114..132 CDD:473069 15/17 (88%)
RRM2_IGF2BP3 136..211 CDD:410039 61/74 (82%)
KH-I_IGF2BP3_rpt1 252..327 CDD:411920 66/74 (89%)
KH-I 330..424 CDD:469614 88/93 (95%)
KH-I_IGF2BP3_rpt3 457..534 CDD:411926 70/76 (92%)
KH-I_IGF2BP1_rpt4 542..617 CDD:411927 68/76 (89%)
igf2bp3NP_001017139.1 RRM1_IGF2BP3 1..77 CDD:410036 15/17 (88%)
RRM2_IGF2BP3 81..156 CDD:410039 61/74 (82%)
KH-I_IGF2BP1_rpt1 207..282 CDD:411918 66/74 (89%)
KH-I 285..379 CDD:469614 88/93 (95%)
KH-I 415..492 CDD:469614 70/76 (92%)
KH-I 500..571 CDD:469614 65/70 (93%)

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