DRSC/TRiP Functional Genomics Resources

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Protein Alignment IGF2BP3 and imph-1

DIOPT Version :10

Sequence 1:XP_047275738.1 Gene:IGF2BP3 / 10643 HGNCID:28868 Length:634 Species:Homo sapiens
Sequence 2:NP_001263700.1 Gene:imph-1 / 175595 WormBaseID:WBGene00010908 Length:854 Species:Caenorhabditis elegans


Alignment Length:665 Identity:158/665 - (23%)
Similarity:263/665 - (39%) Gaps:187/665 - (28%)


- Green bases have known domain annotations that are detailed below.


Human   133 QRIRKLQIRNIPPHLQWEVLDSLLVQYGVVESCEQVNTDSETAVVN--------VTYSSKDQARQ 189
            |::::.|..|...|...:.|.::..|     ..:|::...:.|.:|        .|.....|.:|
 Worm   167 QQMQQQQQSNQSAHFMHQQLQAVQQQ-----QAQQMHHRLQGAPINPQQFMVPPPTMMQPQQMQQ 226

Human   190 ALDKLNGFQLENFTLKVAYIPDEMA--AQQ--NPLQQPRGRRGLGQRGSSRQGSPG-------SV 243
            | .:....|:....:.....|..|.  |||  :|.||.:..:. ||...|...|..       :.
 Worm   227 A-QQQQAQQMHQMQIHHQQHPQMMQQHAQQGYHPHQQNQQHQA-GQHQQSHHQSQNHNQHRNHNQ 289

Human   244 SKQKP-----------C---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKID---VHRKEN 291
            |...|           |   |.|:|.:|..::...|||..|:||::|...|:.::|   :.:||.
 Worm   290 SHSGPHHIPQNLMMPRCMLKDWPIRCVVEGKYHAVIIGPNGSTIKDIASSTRCRVDFVNLSKKER 354

Human   292 A--GAAEKSITILSTPEGTSAACKSILEIMHKEA--QDIKFTEEIPLKILAHNNFVGRLIGKEGR 352
            .  |..::.:|:....|..:.|...||:::..||  .|:....:..|::.|||...||||||.|.
 Worm   355 TVLGNNDRILTVHGVAEQATKAVARILDVIQSEAVKDDVNVGADTVLRMRAHNQLCGRLIGKAGS 419

Human   353 NLKKIEQDTDTKITISPLQE-------LT----LYNPERTITVKG-NVETCAKAEEEIMKKIRES 405
            ::|:|.|.|.|.||::...|       ||    |...||||.|:| ::|...:||..|..|:::.
 Worm   420 SIKEIMQKTGTNITVTKYIEPPGGISGLTANELLGLMERTIMVRGPSIEAVVQAEALISAKLKKC 484

Human   406 YENDIASMNLQAHLIPGLNLNALGLFPPTSGMPP--PTSGPPSAMTPPY-----------PQFEQ 457
            ||:| :.:..|:...|         .||.. |||  |.....||::.|:           ..|..
 Worm   485 YESD-SQLRAQSMQCP---------MPPMM-MPPILPPGASSSAVSAPHFIPTPVGVMQVQHFAS 538

Human   458 SE-------------------------TETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIA 497
            |:                         ...|.:::|...:||:||.:|::||.:.|..|||:|| 
 Worm   539 SQHLVHQNANNSFLQPGVLQIQPGTTNLRQVRMWVPDSMIGALIGAKGKNIKMIIRDTGASVKI- 602

Human   498 PAEAPDAKV------------------------------------------------------RM 508
              |||:.|.                                                      ||
 Worm   603 --EAPEEKTQREAEEAEKKRKLDETDSGCEGVASGDHPQEFLEDNATINSSDAIEEKPKPVSERM 665

Human   509 VIITGPPEAQFKAQGRIYGKIKEENFVSP--------KEEVKLEAHIRVPSFAAGRVIGKGGKTV 565
            |.|.|......|||..::.||.|.:...|        ...:::...:.||:...||:|||||:.|
 Worm   666 VTINGDDLQLLKAQSYVFSKIAETSSSLPSSGMDGDRSHMLRIRTEVSVPTRIIGRIIGKGGQNV 730

Human   566 NELQNLSSAEVVVPRDQTPD----------ENDQVVVKITGHFYACQVAQRKIQEILTQVKQ--- 617
            .|||.::.|.|.:|.::...          |.|..:::..|:.|:....|.::..::.:..:   
 Worm   731 RELQRITGAVVKIPEEERNGGEVYRHDDGLEEDMTMIRTIGNMYSTHNVQFRLAHLVNEYYRSGD 795

Human   618 HQQQKA-LQSGPPQS 631
            |:.:.: .:.|.|.|
 Worm   796 HRNKSSDYKGGRPHS 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IGF2BP3XP_047275738.1 RRM_SF <114..132 CDD:473069
RRM2_IGF2BP3 136..211 CDD:410039 13/82 (16%)
KH-I_IGF2BP3_rpt1 252..327 CDD:411920 23/81 (28%)
KH-I 330..424 CDD:469614 38/105 (36%)
KH-I_IGF2BP3_rpt3 457..534 CDD:411926 31/155 (20%)
KH-I_IGF2BP1_rpt4 542..617 CDD:411927 21/84 (25%)
imph-1NP_001263700.1 KH 313..384 CDD:197652 19/70 (27%)
KH-I_IGF2BP_rpt2 400..483 CDD:411829 33/82 (40%)
KH-I 569..>612 CDD:469614 19/45 (42%)
KH-I 709..783 CDD:469614 21/73 (29%)
Blue background indicates that the domain is not in the aligned region.

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