DRSC/TRiP Functional Genomics Resources

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Protein Alignment IGF2BP1 and imph-1

DIOPT Version :10

Sequence 1:NP_006537.3 Gene:IGF2BP1 / 10642 HGNCID:28866 Length:577 Species:Homo sapiens
Sequence 2:NP_001263700.1 Gene:imph-1 / 175595 WormBaseID:WBGene00010908 Length:854 Species:Caenorhabditis elegans


Alignment Length:647 Identity:161/647 - (24%)
Similarity:268/647 - (41%) Gaps:154/647 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    64 QGKRLEIEHSVPKKQRSRKI------QIRNIPPQLRWEVLDSLLAQYGTVENCEQVNTESETAV- 121
            ||.|.:....:.::|:|.:.      |::.:..|...::...|   .|...|.:|......|.: 
 Worm   159 QGARQQHPQQMQQQQQSNQSAHFMHQQLQAVQQQQAQQMHHRL---QGAPINPQQFMVPPPTMMQ 220

Human   122 -VNVTYSNREQTRQAIMKLNGHQ-----LENHALKVSYIPDEQIAQ---GPENGRRGGFGSRGQP 177
             ..:..:.::|.:|.......||     ::.|| :..|.|.:|..|   |..........:..|.
 Worm   221 PQQMQQAQQQQAQQMHQMQIHHQQHPQMMQQHA-QQGYHPHQQNQQHQAGQHQQSHHQSQNHNQH 284

Human   178 RQGSPVAAGAPAKQQQV--------DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKID---V 231
            |..:...:|.....|.:        |.|:|.:|..:|...|||..|:||::|...|:.::|   :
 Worm   285 RNHNQSHSGPHHIPQNLMMPRCMLKDWPIRCVVEGKYHAVIIGPNGSTIKDIASSTRCRVDFVNL 349

Human   232 HRKENA--GAAEKAISVHSTPEGCSSACKMILEIMHKEA--KDTKTADEVPLKILAHNNFVGRLI 292
            .:||..  |..::.::||...|..:.|...||:::..||  .|.....:..|::.|||...||||
 Worm   350 SKKERTVLGNNDRILTVHGVAEQATKAVARILDVIQSEAVKDDVNVGADTVLRMRAHNQLCGRLI 414

Human   293 GKEGRNLKKVEQDTETKITIS-------SLQDLT----LYNPERTITVKG-AIENCCRAEQEIMK 345
            ||.|.::|::.|.|.|.||::       .:..||    |...||||.|:| :||...:||..|..
 Worm   415 GKAGSSIKEIMQKTGTNITVTKYIEPPGGISGLTANELLGLMERTIMVRGPSIEAVVQAEALISA 479

Human   346 KVREAYEND--VAAMSLQSHLIPGLNLAAVGLFP--ASSSAVP-----PPPSSVTGAAPY----- 396
            |:::.||:|  :.|.|:|..:.|   :....:.|  ||||||.     |.|..|.....:     
 Worm   480 KLKKCYESDSQLRAQSMQCPMPP---MMMPPILPPGASSSAVSAPHFIPTPVGVMQVQHFASSQH 541

Human   397 -------SSFMQ---------APEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE 445
                   :||:|         ......|::::|...:||:||.||::||.:.|...||:||..||
 Worm   542 LVHQNANNSFLQPGVLQIQPGTTNLRQVRMWVPDSMIGALIGAKGKNIKMIIRDTGASVKIEAPE 606

Human   446 ----------------------------------------------------TPDSKVRMVIITG 458
                                                                .|.|: |||.|.|
 Worm   607 EKTQREAEEAEKKRKLDETDSGCEGVASGDHPQEFLEDNATINSSDAIEEKPKPVSE-RMVTING 670

Human   459 PPEAQFKAQGRIYGKLKEENFFGP--------KEEVKLETHIRVPASAAGRVIGKGGKTVNELQN 515
            ......|||..::.|:.|.:...|        ...:::.|.:.||....||:|||||:.|.|||.
 Worm   671 DDLQLLKAQSYVFSKIAETSSSLPSSGMDGDRSHMLRIRTEVSVPTRIIGRIIGKGGQNVRELQR 735

Human   516 LTAAEVVVPRDQTPD----------ENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKG 567
            :|.|.|.:|.::...          |.|..:::.||:.|::...|.::..:   |.:.::.|
 Worm   736 ITGAVVKIPEEERNGGEVYRHDDGLEEDMTMIRTIGNMYSTHNVQFRLAHL---VNEYYRSG 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IGF2BP1NP_006537.3 RRM1_IGF2BP1 1..77 CDD:241069 3/12 (25%)
RRM2_IGF2BP1 81..156 CDD:410037 14/87 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..190 5/32 (16%)
KH-I_IGF2BP1_rpt1 197..272 CDD:411918 25/81 (31%)
KH-I_IGF2BP1_rpt2 273..369 CDD:411921 39/109 (36%)
Sufficient for nuclear export 310..324 5/24 (21%)
KH-I_IGF2BP1_rpt3 404..479 CDD:411924 29/126 (23%)
Sufficient for nuclear export 485..495 1/9 (11%)
KH-I_IGF2BP1_rpt4 487..562 CDD:411927 25/84 (30%)
imph-1NP_001263700.1 KH 313..384 CDD:197652 21/70 (30%)
KH-I_IGF2BP_rpt2 400..483 CDD:411829 32/82 (39%)
KH-I 569..>612 CDD:469614 17/42 (40%)
KH-I 709..783 CDD:469614 24/73 (33%)

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