DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GAS2L1 and pigs

DIOPT Version :10

Sequence 1:NP_006469.2 Gene:GAS2L1 / 10634 HGNCID:16955 Length:681 Species:Homo sapiens
Sequence 2:NP_572331.2 Gene:pigs / 31596 FlyBaseID:FBgn0029881 Length:977 Species:Drosophila melanogaster


Alignment Length:829 Identity:257/829 - (31%)
Similarity:349/829 - (42%) Gaps:223/829 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    13 AKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGTTLCQHANAVTEAARALA 77
            |:..|||:|||.|:|||:|||||||:.||. .|....|.|:..|.||..||:|||.|.:||....
  Fly     6 ARPYRPFKSSEEYLEAMREDLAEWLSTLYP-ELSINADNFMDRLDTGVALCKHANYVRQAAVDYL 69

Human    78 AARPAR-------------------GVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVLMFE 123
            |.|.||                   |......:...|:|.|||||:.||.|||..|.:.|.|:||
  Fly    70 ARRQARNKSMTRSMTSGLAGPILAMGNVHYLPAAKSGTFFARDNVSNFITWCRKSLKIIECLLFE 134

Human   124 TEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAAGEDTTET- 187
            |:||::|||||.|:|||||||||||:.|:|||.|||.|::|:||: ||....|.....|:.|:| 
  Fly   135 TDDLIMRKNEKHVILCLLEVARRGAKFGMLAPMLVQMERQIDREI-AADIKANGAGCSENGTQTD 198

Human   188 APAPGTPARG--------------------------------------PRMTPSDLRNLDELVRE 214
            |...|..:..                                      |::..:||::|||:||:
  Fly   199 ALETGNSSAATMTTITTTTVETDLYDDSDDSETEDDGDQNPVLMYGPQPQIITNDLKSLDEMVRD 263

Human   215 ILGRCTCPDQFPMIKVSEGKYRVGDSSLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSST 279
            ::.:||||.||||::|||||||:||:.:|||||:||||||||||||||||.|||||||||||.: 
  Fly   264 LVEKCTCPSQFPMVRVSEGKYRIGDTKVLIFVRILRSHVMVRVGGGWDTLSHYLDKHDPCRCRA- 327

Human   280 AHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRP--EMTPVSLR------STKEGPET-- 334
            .||       :....|:.|..||. .:|..|.|...::.  |.:|.:.|      :...||.|  
  Fly   328 QHR-------SSVAARLIPRQSPN-HNPSNGIELHKAQVIFERSPPAARRVFNSPNCNGGPGTGS 384

Human   335 -----------PPRPRDQLPPHPRSRRYSGDS------------DSSASSAQSGPLGTRSDDTGT 376
                       ||..::.....|.|.:|...|            :....::.:|...|.:.||.:
  Fly   385 SCGTGVVGVAVPPTLQNGHSLSPNSGKYRSRSPTPQRKFLNQQANGGGIASATGSSQTVTTDTSS 449

Human   377 GPRRERPSRRLTTGTPASPRRPPALRSQ--SRDRLDRGRPRGAP----------GGRGAQLSVPS 429
            |.....||....:.:| ||||...:|.:  |.|....| |:..|          ||.|    |.|
  Fly   450 GQLLGSPSLARRSMSP-SPRRLIDMRKKQSSLDSYSSG-PKSLPGYSCSMEEANGGSG----VGS 508

Human   430 PARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPE 494
            .|....|                          ||.|||.:..|      ..|.:...:|....|
  Fly   509 AAGGVSS--------------------------GSAGSGVAGEQ------GGANKFENISDNGSE 541

Human   495 LGTTPASIFRT--PLQLDPQQEQQLFRRLE-EEFLANARALEAVASVTPTGPAPDPARAP----- 551
            :....   :|:  .:|...|:.:.|..:.. |:..:||| |:..:|.:...|:.:||...     
  Fly   542 ISDEG---YRSLGVIQSGAQKRESLHSQASIEDAESNAR-LDQTSSDSQISPSDEPAEKATTDIL 602

Human   552 ----------DPPAPDSAYCSSSSS----SSSLSVLGGKCGQPG----------DSGRT-----A 587
                      :....|.:.|....|    .|....|..|..|.|          |..:|     |
  Fly   603 EEEDLNGQDREEDQEDYSVCDGPQSLPAILSGAHKLSDKFEQSGVFITDDEITVDIAKTEDQSVA 667

Human   588 N--GLPGPRSQALSSS--------SDEGSPCPGMGGPLD-------APGSPLACTEPSRTWARGR 635
            |  |.|.|....:..|        |.:.|.|.|.||.|.       .|....:..:|.....|.|
  Fly   668 NTMGNPTPNLSKIPRSPLAQRRRRSIDNSTCGGAGGSLQDLSSRSGLPAPAFSRKQPVYRSVRTR 732

Human   636 MDTQPDRKPSRIPTPRGPRRPSGPAEL-------GTWHALHSVTPRAEP 677
            ..|      ....||..|.|.....:|       .||....:..|:..|
  Fly   733 NST------GATTTPVAPPRSRQATQLPMVRDVTNTWSGRTTGAPKRRP 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAS2L1NP_006469.2 CH_GAS2L1_2 18..152 CDD:409117 74/152 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..204 9/74 (12%)
GAS2 208..276 CDD:460480 52/67 (78%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 278..509 56/277 (20%)
PHA03247 <283..662 CDD:223021 98/477 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 536..681 41/200 (21%)
pigsNP_572331.2 CH_GAS2L1_2 11..163 CDD:409117 74/152 (49%)
GAS2 257..325 CDD:460480 52/67 (78%)

Return to query results.
Submit another query.