DRSC/TRiP Functional Genomics Resources

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Protein Alignment TRIM16 and trim16

DIOPT Version :10

Sequence 1:NP_006461.3 Gene:TRIM16 / 10626 HGNCID:17241 Length:564 Species:Homo sapiens
Sequence 2:NP_001315091.1 Gene:trim16 / 568734 ZFINID:ZDB-GENE-090512-6 Length:589 Species:Danio rerio


Alignment Length:550 Identity:244/550 - (44%)
Similarity:344/550 - (62%) Gaps:27/550 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    27 SGSPSPDSGSASPVEEEDVGSSE--------------KLGRETEEQDSDSAEQGDPAGEGKEVLC 77
            :||| |:..:..   |:||.:.|              |..::.::.|.|..|:.:.......|.|
Zfish    43 NGSP-PEKHTEG---EKDVKTIEESKIQKDLKEIEVNKESKDPQKDDEDDEEEEEEVLGPDVVTC 103

Human    78 DFCLDDTRRVKAVKSCLTCMVNYCEEHLQPHQVNIKLQSHLLTEPVKDHNWRYCPAHHSPLSAFC 142
            |.|:|...|.|  ||||||:|:|||.||:||..|.|.|||.|.:|::|...|.|.||.|||..:|
Zfish   104 DSCIDKPCRAK--KSCLTCLVSYCESHLRPHLENAKFQSHRLVDPLRDIERRTCEAHRSPLELYC 166

Human   143 CPDQQCICQDC-CQEHSGHTIVSLDAARRDKEAELQCTQLDLERKLKLNENAISRLQANQKSVLV 206
            |  ..|:|..| .:||.||..:.:..|||:.|.|||..|.::.:.:...||||::||.|..|:..
Zfish   167 C--MCCLCPACVTEEHLGHQALPIAEARRNIEKELQDKQTEMLKTMTAAENAINKLQVNTVSIEG 229

Human   207 SVSEVKAVAEMQFGELLAAVRKAQANVMLFLEEKEQAALSQANGIKAHLEYRSAEMEKSKQELER 271
            ||.||:||.|.||..|.|||.:.:.:|...||.:|:.||.||:||:.|||.|.||::|::..:::
Zfish   230 SVQEVRAVMEEQFSILQAAVEQVKRDVCELLEAEERQALRQADGIRVHLEQRCAELKKTQSRVQK 294

Human   272 MAAISNTVQFLEEYCKF-KNTEDITFPSVYVGLKDKLSGIRKVITESTVHLI-QLLENYKKKLQE 334
            ::...:.:.||:||.:: |...|::.|.||:||.|:|.....||..||..:. .|..:|..||::
Zfish   295 ISKNKHDIHFLQEYSEWKKEAVDVSLPGVYIGLVDRLQAFSHVIVRSTNRMCDNLHSSYTNKLKD 359

Human   335 FSKEEEYDIRTQVSAVVQRKYWTSKPEPSTREQFLQYAYDITFDPDTAHKYLRLQEENRKVTNTT 399
            ..|.:...|:|.|.||:..|.....|:|.||:.||||...::.|.:|||.:|||.||.:||||||
Zfish   360 TCKNDNVGIKTTVFAVMAAKKNMMLPDPKTRDDFLQYVTPLSLDANTAHVFLRLTEECKKVTNTT 424

Human   400 PWEHPYPDLPSRFLHWRQVLSQQSLYLHRYYFEVEIFGAGTYVGLTCKGIDRKGEERNSCISGNN 464
            ||:|.|||||.||..::|||:|:|.||.|:||||::.|.||:||||.|.|||||.:.||||:|||
Zfish   425 PWQHSYPDLPERFQDFKQVLTQESFYLGRHYFEVDMKGEGTHVGLTYKSIDRKGSQSNSCIAGNN 489

Human   465 FSWSLQWNGKEFTAWYSDMETPLKAGPFRRLGVYIDFPGGILSFYGVEYDTMTLVHKFACKFSEP 529
            |||.|||||:.|:||:||:||||.......:|:|:|:.||:|:||.|| :.|||:||:..:|.||
Zfish   490 FSWCLQWNGRSFSAWHSDVETPLSCPKTTHIGIYVDYSGGLLAFYDVE-NGMTLIHKYQAEFLEP 553

Human   530 VYAAFWLSKKENAIRIVDLGEEP-EKPAPS 558
            :|.||||.||||.:.:......| ..|:||
Zfish   554 LYPAFWLPKKENVVLLEPGAASPLSSPSPS 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRIM16NP_006461.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 12/55 (22%)
Bbox1_TRIM16 75..122 CDD:380897 27/46 (59%)
Bbox_SF 129..173 CDD:469587 19/44 (43%)
CusB_dom_1 <164..>283 CDD:481212 47/118 (40%)
SPRY_PRY_TRIM16 365..546 CDD:293948 106/180 (59%)
trim16NP_001315091.1 Bbox_SF 101..146 CDD:469587 27/46 (59%)
COG4372 194..>295 CDD:443500 43/100 (43%)
SPRY_PRY_TRIM16 390..569 CDD:293948 106/179 (59%)

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