DRSC/TRiP Functional Genomics Resources

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Protein Alignment TRIM16 and ago

DIOPT Version :10

Sequence 1:NP_006461.3 Gene:TRIM16 / 10626 HGNCID:17241 Length:564 Species:Homo sapiens
Sequence 2:NP_523922.1 Gene:ago / 38516 FlyBaseID:FBgn0041171 Length:1326 Species:Drosophila melanogaster


Alignment Length:364 Identity:66/364 - (18%)
Similarity:100/364 - (27%) Gaps:165/364 - (45%)


- Green bases have known domain annotations that are detailed below.


Human    23 LSPDSGSPSPDSGSASPVEEEDVGSS---EKLGRETEEQ---------------DSDSAEQGD-- 67
            |:|.:...|...||....:||:|.:|   ..:|.:|.::               .:.||..||  
  Fly   507 LAPTTSGSSTSGGSCQQDQEENVSASVSYSSVGSQTSQESGCSRTTAINPTAACSTGSACLGDSQ 571

Human    68 -------PAGEGKEVLCDFCLDDTRRVKAVKSCLTCMVNYCEEHLQPHQVNIKLQS--------- 116
                   .:|.|....|.:....|  .||.:                 |||...|:         
  Fly   572 ASTSASTSSGAGASNRCQYATTST--TKAAR-----------------QVNASAQTQERFLTRSN 617

Human   117 -----------------------------HL--------------LTEP---VKDHNWRYCPAHH 135
                                         ||              :.||   ..:..|..|...:
  Fly   618 PPAASGAGSVGANPTASVRQRRNGSSDVVHLEVVVEEGAGGGDGGVVEPGDFSAEEPWANCDEEN 682

Human   136 SPLSAFCCPDQQCICQDCCQEHSGHT----------IVSLDAARRDKEAELQC-------TQLDL 183
            :      |.|.:.||  .||..:|.:          ...:||...|:...|..       |:..|
  Fly   683 N------CSDLEEIC--TCQNGNGSSYGGSNASLSETFDMDAMDPDEPISLSLSSASAGFTEYSL 739

Human   184 ---------ERKLKLNENAISRLQANQKSVLVSVSEVKAVAEMQFGELLAAVRKAQANVMLFLEE 239
                     :||.|.||..:  |.....||.:|.|          ||    |....:.|      
  Fly   740 TNPSSLMSHQRKRKFNEGRL--LDGGDYSVTISSS----------GE----VGGPGSGV------ 782

Human   240 KEQAALSQANGIKAHLEYRSAEMEKSKQELERMAAISNT 278
                    ::..:..:.|..|...:|.|.|...|.:|.|
  Fly   783 --------SDNCRKRIAYDFASTPRSSQHLGPTAVLSVT 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRIM16NP_006461.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 15/72 (21%)
Bbox1_TRIM16 75..122 CDD:380897 10/98 (10%)
Bbox_SF 129..173 CDD:469587 11/53 (21%)
CusB_dom_1 <164..>283 CDD:481212 28/131 (21%)
SPRY_PRY_TRIM16 365..546 CDD:293948
agoNP_523922.1 F-box_FBXW7 875..933 CDD:438905
WD40 <979..1267 CDD:441893
WD40 repeat 998..1033 CDD:293791
WD40 repeat 1039..1073 CDD:293791
WD40 repeat 1078..1112 CDD:293791
WD40 repeat 1119..1152 CDD:293791
WD40 repeat 1158..1192 CDD:293791
WD40 repeat 1200..1232 CDD:293791
WD40 repeat 1241..1263 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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