DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLCO1B1 and CG30278

DIOPT Version :10

Sequence 1:NP_006437.3 Gene:SLCO1B1 / 10599 HGNCID:10959 Length:691 Species:Homo sapiens
Sequence 2:NP_726180.1 Gene:CG30278 / 246523 FlyBaseID:FBgn0050278 Length:275 Species:Drosophila melanogaster


Alignment Length:266 Identity:50/266 - (18%)
Similarity:91/266 - (34%) Gaps:93/266 - (34%)


- Green bases have known domain annotations that are detailed below.


Human   249 PTDS--RWVGAWWLNFLVSGLFSIIS--------SIPFFFLPQ----------TPNKPQKER--- 290
            |.:|  ||:...|::......|....        |.|...||:          .|:.|.::.   
  Fly     4 PENSCRRWIKKNWVDGPCKKCFESTCGPCIDYRVSPPAADLPEPQAEVVKAVIEPDGPVRQEINI 68

Human   291 --KASLSLHVLETNDEKDQTANL-TNQGKNITKNVTGFFQSFKSILTNPLYVMFVLLTLLQVSSY 352
              :.|....:||::.:|.:...: ..|.:|:..|:.       |....||            .:|
  Fly    69 RAECSKGRPLLESDKDKLRCCTMCVAQEQNLHPNLC-------SAQCRPL------------KTY 114

Human   353 IGAFTYVFKYVEQQYGQPSSKANILLGVITIPIFASGMFLGGYIIKKFKLNTVGIAKFSCFTAVM 417
            :    ::.::.::...:|:.|.:::|...||        :|.....||:|..   .|.:|..   
  Fly   115 L----HLNEWTKRPLPKPTYKHSVILDNNTI--------VGRCFPMKFQLRR---TKKNCLD--- 161

Human   418 SLSFYLLYFFILCENKSVAGLTMTYDGNNPVTSHRDVPLSYCNSDCNCDESQWEPV-----CGNN 477
                        |.|:    |...|    |:|::.|:.|..     ||.|.:..|.     ..|.
  Fly   162 ------------CGNE----LYYRY----PITNNSDLLLIK-----NCCEVEVYPAKKVENMNNV 201

Human   478 GITYIS 483
            .:|.||
  Fly   202 RVTKIS 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLCO1B1NP_006437.3 MFS 27..561 CDD:475125 50/266 (19%)
CG30278NP_726180.1 None

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