DRSC/TRiP Functional Genomics Resources

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Protein Alignment POMT1 and Pomt1

DIOPT Version :10

Sequence 1:NP_009102.4 Gene:POMT1 / 10585 HGNCID:9202 Length:747 Species:Homo sapiens
Sequence 2:NP_001411588.1 Gene:Pomt1 / 99011 MGIID:2138994 Length:748 Species:Mus musculus


Alignment Length:746 Identity:623/746 - (83%)
Similarity:681/746 - (91%) Gaps:22/746 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MWGFLKRPVVVTADINLSLVALTGMGLLSRLWRLTYPRAVVFDEVYYGQYISFYMKQIFFLDDSG 65
            |..|||||:|||.||||:||||||:|||:|||:|:|||||||||||||||||||||:||||||||
Mouse    25 MLRFLKRPLVVTVDINLNLVALTGLGLLTRLWQLSYPRAVVFDEVYYGQYISFYMKRIFFLDDSG 89

Human    66 PPFGHMVLALGGYLGGFDGNFLWNRIGAEYSSNVPVWSLRLLPALAGALSVPMAYQIVLELHFSH 130
            ||||||:|||||:||||||||||||||||||||||:|||||||||||||||||||||||||||||
Mouse    90 PPFGHMLLALGGWLGGFDGNFLWNRIGAEYSSNVPIWSLRLLPALAGALSVPMAYQIVLELHFSH 154

Human   131 CAAMGAALLMLIENALITQSRLMLLESVLIFFNLLAVLSYLKFFNCQKHSPFSLSWWFWLTLTGV 195
            .||:|||||||||||||||||||||||:|||||||||||||||||.|.|||||:.||.||.||||
Mouse   155 GAAIGAALLMLIENALITQSRLMLLESILIFFNLLAVLSYLKFFNSQTHSPFSVHWWLWLLLTGV 219

Human   196 ACSCAVGIKYMGVFTYVLVLGVAAVHAWHLLGDQTLSNVGADVQCCMRPACMGQMQMSQGVCVFC 260
            :|||||||||||:|||:||||:||||||:|:|||||||        ||              |..
Mouse   220 SCSCAVGIKYMGIFTYLLVLGIAAVHAWNLIGDQTLSN--------MR--------------VLS 262

Human   261 HLLARAVALLVIPVVLYLLFFYVHLILVFRSGPHDQIMSSAFQASLEGGLARITQGQPLEVAFGS 325
            |||||.|||||:||.||||||||||:|::||||||||||||||||||||||||||||||||||||
Mouse   263 HLLARIVALLVVPVFLYLLFFYVHLMLLYRSGPHDQIMSSAFQASLEGGLARITQGQPLEVAFGS 327

Human   326 QVTLRNVFGKPVPCWLHSHQDTYPMIYENGRGSSHQQQVTCYPFKDVNNWWIVKDPRRHQLVVSS 390
            ||||::|.|||:|||||||::|||||||||||||||||||||||||:|||||||||.||||||::
Mouse   328 QVTLKSVSGKPLPCWLHSHKNTYPMIYENGRGSSHQQQVTCYPFKDINNWWIVKDPGRHQLVVNN 392

Human   391 PPRPVRHGDMVQLVHGMTTRSLNTHDVAAPLSPHSQEVSCYIDYNISMPAQNLWRLEIVNRGSDT 455
            |||||||||:||||||||||.|||||||||||||||||||||||||||||||||:|:||||.|:.
Mouse   393 PPRPVRHGDIVQLVHGMTTRLLNTHDVAAPLSPHSQEVSCYIDYNISMPAQNLWKLDIVNRESNR 457

Human   456 DVWKTILSEVRFVHVNTSAVLKLSGAHLPDWGYRQLEIVGEKLSRGYHGSTVWNVEEHRYGASQE 520
            |.|||||||||||||||||:||||||||||||:||||:||||||.|||.|.||||||||||.|.|
Mouse   458 DTWKTILSEVRFVHVNTSAILKLSGAHLPDWGFRQLEVVGEKLSPGYHESMVWNVEEHRYGKSHE 522

Human   521 QRERERELHSPAQVDVSRNLSFMARFSELQWRMLALRSDDSEHKYSSSPLEWVTLDTNIAYWLHP 585
            |:|||.|||||.|:|:|||||||||||||||:||.|:::|.||:|||:||||:||||||||||||
Mouse   523 QKERELELHSPTQLDISRNLSFMARFSELQWKMLTLKNEDLEHQYSSTPLEWLTLDTNIAYWLHP 587

Human   586 RTSAQIHLLGNIVIWVSGSLALAIYALLSLWYLLRRRRNVHDLPQDAWLRWVLAGALCAGGWAVN 650
            |||||||||||||||.|.|||..:|.||..||||||||::.|||:|||.|||||||||.||||:|
Mouse   588 RTSAQIHLLGNIVIWTSASLATVVYTLLFFWYLLRRRRSICDLPEDAWSRWVLAGALCTGGWALN 652

Human   651 YLPFFLMEKTLFLYHYLPALTFQILLLPVVLQHISDHLCRSQLQRSIFSALVVAWYSSACHVSNT 715
            ||||||||:.||||||||||||||||||:||||.|||||||||||::|||||||||||||||||.
Mouse   653 YLPFFLMERVLFLYHYLPALTFQILLLPIVLQHASDHLCRSQLQRNVFSALVVAWYSSACHVSNM 717

Human   716 LRPLTYGDKSLSPHELKALRWKDSWDILIRK 746
            ||||||||.||||.||:||||||||||||||
Mouse   718 LRPLTYGDTSLSPGELRALRWKDSWDILIRK 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POMT1NP_009102.4 PMT 20..289 CDD:396786 217/268 (81%)
beta-trefoil_MIR_POMT1 321..515 CDD:467752 169/193 (88%)
PMT_4TMC 544..738 CDD:465056 159/193 (82%)
Pomt1NP_001411588.1 PMT 56..291 CDD:396786 207/256 (81%)
beta-trefoil_MIR_POMT1 323..517 CDD:467752 169/193 (88%)
PMT_4TMC 546..740 CDD:465056 159/193 (82%)

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