DRSC/TRiP Functional Genomics Resources

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Protein Alignment NPC2 and npc2.1

DIOPT Version :10

Sequence 1:NP_001350617.1 Gene:NPC2 / 10577 HGNCID:14537 Length:174 Species:Homo sapiens
Sequence 2:NP_775331.1 Gene:npc2.1 / 282673 ZFINID:ZDB-GENE-021206-13 Length:149 Species:Danio rerio


Alignment Length:141 Identity:86/141 - (60%)
Similarity:114/141 - (80%) Gaps:0/141 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     9 LLLALSTAAQAEPVQFKDCGSVDGVIKEVNVSPCPTQPCQLSKGQSYSVNVTFTSNIQSKSSKAV 73
            :||:......|:||:|.|||||||.:.:|::.||..|||:|.|||||:|||||:|.::|::||||
Zfish     9 VLLSFLAYTCADPVKFVDCGSVDGKVVQVDIKPCSQQPCKLHKGQSYTVNVTFSSGVESQTSKAV 73

Human    74 VHGILMGVPVPFPIPEPDGCKSGINCPIQKDKTYSYLNKLPVKSEYPSIKLVVEWQLQDDKNQSL 138
            |||:|.|||||||||..|||||||.|||...|.|:|:.:||||:|||:||:||||:|:||.::.|
Zfish    74 VHGVLAGVPVPFPIPIDDGCKSGIQCPIVPQKPYNYVTELPVKTEYPAIKVVVEWELRDDSSKDL 138

Human   139 FCWEIPVQIVS 149
            ||.:.|||||:
Zfish   139 FCIKFPVQIVN 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPC2NP_001350617.1 Npc2_like 24..145 CDD:238458 76/120 (63%)
npc2.1NP_775331.1 Npc2_like 24..145 CDD:238458 76/120 (63%)

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