DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPTLC1 and sptlc1

DIOPT Version :10

Sequence 1:NP_001268232.1 Gene:SPTLC1 / 10558 HGNCID:11277 Length:513 Species:Homo sapiens
Sequence 2:NP_001018307.1 Gene:sptlc1 / 553981 ZFINID:ZDB-GENE-050522-61 Length:472 Species:Danio rerio


Alignment Length:437 Identity:375/437 - (85%)
Similarity:405/437 - (92%) Gaps:0/437 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     6 EQWVLVEMVQALYEAPAYHLILEGILILWIIRLLFSKTYKLQERSDLTVKEKEELIEEWQPEPLV 70
            :||||||||||.||||||||||||.|||||||||||||||||||||||.||||||||||||||||
Zfish     5 QQWVLVEMVQAFYEAPAYHLILEGFLILWIIRLLFSKTYKLQERSDLTEKEKEELIEEWQPEPLV 69

Human    71 PPVPKDHPALNYNIVSGPPSHKTVVNGKECINFASFNFLGLLDNPRVKAAALASLKKYGVGTCGP 135
            .||.||||:|||::|:||||||.:||||||||||||||||||||.|||..|||||||||||||||
Zfish    70 SPVSKDHPSLNYDVVTGPPSHKIIVNGKECINFASFNFLGLLDNERVKLKALASLKKYGVGTCGP 134

Human   136 RGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKRGDIVFVDRAACFAIQKGLQ 200
            |||||||||||:||:||||||:|||||||||||||||||||||||||||:|||.||||:||||||
Zfish   135 RGFYGTFDVHLELEERLAKFMRTEEAIIYSYGFATIASAIPAYSKRGDIIFVDEAACFSIQKGLQ 199

Human   201 ASRSDIKLFKHNDMADLERLLKEQEIEDQKNPRKARVTRRFIVVEGLYMNTGTICPLPELVKLKY 265
            ||||.||.||||||.||||||||||||||||||||||.||||:|||||:||..||||||||||||
Zfish   200 ASRSFIKYFKHNDMEDLERLLKEQEIEDQKNPRKARVIRRFILVEGLYINTADICPLPELVKLKY 264

Human   266 KYKARIFLEESLSFGVLGEHGRGVTEHYGINIDDIDLISANMENALASIGGFCCGRSFVIDHQRL 330
            |||.|||||||:|||||||||||||||:|:|||||||||||||||||||||||||||||||||||
Zfish   265 KYKVRIFLEESMSFGVLGEHGRGVTEHFGVNIDDIDLISANMENALASIGGFCCGRSFVIDHQRL 329

Human   331 SGQGYCFSASLPPLLAAAAIEALNIMEENPGIFAVLKEKCGQIHKALQGISGLKVVGESLSPAFH 395
            |||||||||||||:||||||||||||||:||||.||:|||..:||||||.:||||||||.:||.|
Zfish   330 SGQGYCFSASLPPMLAAAAIEALNIMEEDPGIFRVLREKCRNVHKALQGTAGLKVVGESFAPALH 394

Human   396 LQLEESTGSREQDVRLLQEIVDQCMNRSIALTQARYLEKEEKCLPPP 442
            ||||.|||||..|::||:.|||..::|.:|||.||||:|||:.||||
Zfish   395 LQLENSTGSRVNDLKLLRAIVDYSLDRQVALTLARYLDKEERFLPPP 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPTLC1NP_001268232.1 Interaction with SPTLC2. /evidence=ECO:0000269|PubMed:33558762 1..66 55/59 (93%)
AAT_I 11..442 CDD:450240 369/430 (86%)
sptlc1NP_001018307.1 AAT_I 23..472 CDD:450240 359/419 (86%)

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