DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPTLC1 and lace

DIOPT Version :10

Sequence 1:NP_001268232.1 Gene:SPTLC1 / 10558 HGNCID:11277 Length:513 Species:Homo sapiens
Sequence 2:NP_476614.1 Gene:lace / 34910 FlyBaseID:FBgn0002524 Length:597 Species:Drosophila melanogaster


Alignment Length:271 Identity:87/271 - (32%)
Similarity:145/271 - (53%) Gaps:20/271 - (7%)


- Green bases have known domain annotations that are detailed below.


Human   100 CINFASFNFLGLLDNPRVKAAALA--------SLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFM 156
            |:|..|:|:||.       |||..        |.:..|:..|..|...|..:...:||...|::.
  Fly   215 CLNLGSYNYLGF-------AAATGQCADDSEESARSSGLAYCSSRCELGDNEQLQELEALTARYF 272

Human   157 KTEEAIIYSYGFATIASAIPAYSKRGDIVFVDRAACFAIQKGLQASRSDIKLFKHNDMADLERLL 221
            ..|:||::..||||.|..:|:......:|..|.....:|..||:.|.:..|:||||:|.||||:|
  Fly   273 GVEDAIVFGMGFATNALNLPSLLGPNSLVISDEKNHASIILGLRLSGATTKVFKHNNMRDLERVL 337

Human   222 KEQEIEDQKNPRKARV--TRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFGVLGE 284
            ::...  ..||:|...  .:..|:|||::...|:|..|||::.||.||||.::|:|:.|.|.:|.
  Fly   338 RQGVC--YGNPKKGGQPWDKVMILVEGIFSMEGSIVRLPEVIALKKKYKAYLYLDEAHSVGAMGS 400

Human   285 HGRGVTEHYGINIDDIDLISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAA 349
            .|||||:::.::..::|::......:..|.||:..|...:||..|.:...:|::||:.|.:|...
  Fly   401 RGRGVTDYFNVDPKEVDILMGTFTKSFGSAGGYLAGSKKLIDFLRTNSHAHCYAASISPPIAQQI 465

Human   350 IEAL-NIMEEN 359
            :.:: .||.|:
  Fly   466 LTSMKTIMGED 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPTLC1NP_001268232.1 Interaction with SPTLC2. /evidence=ECO:0000269|PubMed:33558762 1..66
AAT_I 11..442 CDD:450240 87/271 (32%)
laceNP_476614.1 AAT_I 117..587 CDD:450240 87/271 (32%)
Blue background indicates that the domain is not in the aligned region.

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