DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPTLC1 and sptl-1

DIOPT Version :10

Sequence 1:NP_001268232.1 Gene:SPTLC1 / 10558 HGNCID:11277 Length:513 Species:Homo sapiens
Sequence 2:NP_001379707.1 Gene:sptl-1 / 173389 WormBaseID:WBGene00016020 Length:458 Species:Caenorhabditis elegans


Alignment Length:422 Identity:211/422 - (50%)
Similarity:294/422 - (69%) Gaps:12/422 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    22 AYHLILEGILILWIIRLLFSKTYKLQER---SDLTVKEKEELIEEWQPEPLVPPVPKDHPALNYN 83
            ::|..:|.:|:..:..::.....|.|:.   ..||.::|:|||.:|.||||||..|:|||.||..
 Worm     7 SWHFYIETLLVALLAYVVMRNRSKRQQEKLSKKLTERQKDELIADWTPEPLVPETPQDHPVLNPK 71

Human    84 IVSGPPSHKTVVNGKECINFASFNFLGLLDNPRVKAAALASLKKYGVGTCGPRGFYGTFDVHLDL 148
            ...|..:....::|::.:|.||.|||..:...|::..|..::.|||||:|||||||||.||||||
 Worm    72 YADGKMTKDVSIDGEKYLNMASTNFLSFIGVKRIEDRAKQTIFKYGVGSCGPRGFYGTVDVHLDL 136

Human   149 EDRLAKFMKTEEAIIYSYGFATIASAIPAYSKRGDIVFVDRAACFAIQKGLQASRSDIKLFKHND 213
            |..|||||..|||::|||||||::||||||:|:||::|||....||||||||||||.::.|||||
 Worm   137 EKELAKFMGCEEAVLYSYGFATVSSAIPAYAKKGDVIFVDEGVNFAIQKGLQASRSRVEYFKHND 201

Human   214 MADLERLLKEQEIEDQKNPRKARVTRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLS 278
            |..|||||.|||..|:|:|:||:..||||||||||:|...:||||::::.|:::|.|:|::||.|
 Worm   202 MEHLERLLLEQEQRDKKDPKKAKSVRRFIVVEGLYVNYADLCPLPKIIEFKWRFKVRVFIDESWS 266

Human   279 FGVLGEHGRGVTEHYGINIDDIDLISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPP 343
            |||:|:.|||||||:.:.::|:|::.|::||||||.||||.|||:|:.||||||.||||||||||
 Worm   267 FGVIGKTGRGVTEHFNVPMEDVDMVMASLENALASTGGFCVGRSYVVGHQRLSGLGYCFSASLPP 331

Human   344 LLAAAAIEALNIMEENPGIFAVLKEKCGQIHKALQ-GISGLK--VVGESLSPAFHLQLEESTGSR 405
            |||.||.||::|::|.|.....:.|......|.|| .:||.|  :.|...||..|:..     :.
 Worm   332 LLATAASEAISIIDEEPSRVQKVTEMAINGQKKLQDALSGSKFSLQGCPESPMKHIYY-----NG 391

Human   406 EQDVRLLQEIVDQCMNRS-IALTQARYLEKEE 436
            |.:.:.|...|:....:: :.||:||||:|:|
 Worm   392 EDEEKQLDTFVETVFTKNHLLLTRARYLDKDE 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPTLC1NP_001268232.1 Interaction with SPTLC2. /evidence=ECO:0000269|PubMed:33558762 1..66 12/46 (26%)
AAT_I 11..442 CDD:450240 211/422 (50%)
sptl-1NP_001379707.1 AAT_I 9..455 CDD:450240 211/420 (50%)

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