Protein Alignment RPP38 and rpp38

DIOPT Version :9

• Sequence 1: NP_001091059.1
• Gene: RPP38 / 10557
• HGNCID: 30329
• Length: 283
• Species: Homo sapiens
• Sequence 2: NP_001002525.2
• Gene: rpp38 / 436798
• ZFINID: ZDB-GENE-040718-258
• Length: 265
• Species: Danio rerio
• Alignment Length: 277
• Identity: 127/277 - (45%)
• Similarity: 168/277 - (60%)
• Gaps: 22/277 - (7%)

Human     8 PGRGSLR--KTRPLVVKTSLNNPYIIRWS-ALESEDMHFILQTLEDRLKAIGLQKIEDKKKKNKT 69
            |.:|:.:  |.:|:.|||||||||.|.|| .|:.:..|.||.||:::|.|.||:|  ::..:.:.
Zfish     4 PAKGATKKEKKKPIPVKTSLNNPYNIGWSDLLQKQHKHLILDTLKEKLSATGLRK--ERVSRFRD 66

Human    70 PFLKKESREKCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEVTRALERRELLLVLV 134
            ...::.||:|.|...:......|.....:....|||...:|||||||:||||:.|||.||.||||
Zfish    67 WGSRRRSRKKASKPTEEQNPASEPAESVQTPEPGWTNLALRKQLAIGINEVTKGLERNELSLVLV 131

Human   135 CKSVKPAMITSHLIQLSLSRSVPACQVPRLSERIAPVIGLKCVLALAFKKNTTDFVDEVRAIIPR 199
            |.||.||.:|||||.||.:|||||||||.||..::.::||||||||.|::.:.:|.:.||||.|.
Zfish   132 CNSVTPAHMTSHLIPLSKTRSVPACQVPGLSGSLSELLGLKCVLALGFRRGSEEFENTVRAITPM 196

Human   200 VPSLSVPWLQDRIEDSGENLETEPLESQDRELLDTSFEDLSKPKRKLADGRQASVTLQPLKIKKL 264
            ||.|.|.|:|.....:.:...||  ..|.|:|     |:||.....|        .|||||:||:
Zfish   197 VPQLPVAWIQTDSTPTTKEKRTE--IGQKRKL-----EELSSDASPL--------VLQPLKVKKI 246

Human   265 IPNPNKIRKP--PKSKK 279
            ||||.|||||  .|.||
Zfish   247 IPNPTKIRKPKLKKQKK 263

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RPP38	NP_001091059.1	Ribosomal_L7Ae	107..185	CDD:396000	52/77 (68%)
rpp38	NP_001002525.2	Ribosomal_L7Ae	104..178	CDD:279573	50/73 (68%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C194334167
Domainoid	1	1.000	103	1.000	Domainoid score	I25489
eggNOG	1	0.900	-	-		E1_COG1358
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H4680
Inparanoid	1	1.050	209	1.000	Inparanoid score	I10899
NCBI	1	1.000	-	-
OMA	1	1.010	-	-		QHG39979
OrthoDB	1	1.010	-	-		D1485783at2759
OrthoFinder	1	1.000	-	-		FOG0009589
OrthoInspector	1	1.000	-	-		oto47994
orthoMCL	1	0.900	-	-		OOG6_109504
Panther	1	1.100	-	-	LDO	PTHR46948
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X7336
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	1	1.500	-	-
	17	17.270