DRSC/TRiP Functional Genomics Resources

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Protein Alignment RPP38 and RpS12

DIOPT Version :9

Sequence 1:NP_001091059.1 Gene:RPP38 / 10557 HGNCID:30329 Length:283 Species:Homo sapiens
Sequence 2:NP_729866.1 Gene:RpS12 / 39480 FlyBaseID:FBgn0286213 Length:139 Species:Drosophila melanogaster


Alignment Length:78 Identity:18/78 - (23%)
Similarity:35/78 - (44%) Gaps:22/78 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    83 AVDISENLKE--KKTDAKQQVSGWTPAHVRKQLAIGVNEVTRALERRELLLVLVC--------KS 137
            |:||:..|:|  ||            :.:...|..|:::..:||::|:.:|.::.        |.
  Fly    18 AMDINTALQEVLKK------------SLIADGLVHGIHQACKALDKRQAVLCILAESFDEPNYKK 70

Human   138 VKPAMITSHLIQL 150
            :..|:...|.|.|
  Fly    71 LVTALCNEHQIPL 83

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RPP38NP_001091059.1 Ribosomal_L7Ae 107..185 CDD:396000 11/52 (21%)
RpS12NP_729866.1 Ribosomal_L7Ae 23..118 CDD:396000 15/73 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1358
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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