DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DDX17 and Rm62

DIOPT Version :10

Sequence 1:NP_001091974.1 Gene:DDX17 / 10521 HGNCID:2740 Length:731 Species:Homo sapiens
Sequence 2:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster


Alignment Length:558 Identity:320/558 - (57%)
Similarity:384/558 - (68%) Gaps:46/558 - (8%)


- Green bases have known domain annotations that are detailed below.


Human    82 GGGFGD----------RDRDRDRGG---FGARGGGGLPPKKFGNPG--ERLRKKKWDLSELPKFE 131
            |||.||          :.|| ||||   ||  ||||...::.|..|  :.|..:..|.|.|..|:
  Fly   182 GGGGGDYHGIRNGRVEKRRD-DRGGGNRFG--GGGGFGDRRGGGGGGSQDLPMRPVDFSNLAPFK 243

Human   132 KNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTP 196
            ||||.|||.||..:||||...|.::||||||  ..|.|:..|...:.|.|||..:..|.:..||.
  Fly   244 KNFYQEHPNVANRSPYEVQRYREEQEITVRG--QVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTA 306

Human   197 IQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQ 261
            ||.||:|:|:||.:.||||:|||||||.|:||||||||:|..|:||||||.||||||||||||:|
  Fly   307 IQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQ 371

Human   262 QVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDE 326
            |||.::|..|.:::||::||||||.|:|||:||.||.|||||||||||.:|.|||:|||||||||
  Fly   372 QVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDE 436

Human   327 ADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNIL 391
            |||||||||||||||||.|||||||||||||||||||:|||||||.:|.|||:|:|||||||||.
  Fly   437 ADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIR 501

Human   392 QIVDVCMESEKDHKLIQLMEEI--MAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQ 454
            |:||||.|..|:.||..|:.:|  .:|...|.|||||||||.|:|.|.:|..|.....|||||||
  Fly   502 QVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQ 566

Human   455 PERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAY 519
            .|||:||.||||||:.||:|||||:|||||:.:|:|||:|||.:||||:||||||.||..|||::
  Fly   567 SERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSF 631

Human   520 TFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQD 584
            .|||..|.|||:.|:.||.||||.|||.|..|..:....||   ||||||               
  Fly   632 AFFTKNNAKQAKALVDVLREANQEINPALENLARNSRYDGG---GGRSRY--------------- 678

Human   585 ECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYG 622
                  .|...|||.....::..|.::..|:..|.|.|
  Fly   679 ------GGGGGGGRFGGGGFKKGSLSNGRGFGGGGGGG 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DDX17NP_001091974.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..115 19/47 (40%)
DEAD-like_helicase_N 111..581 CDD:475120 294/473 (62%)
Q motif 171..199 9/27 (33%)
DEAD box 325..328 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 661..731
Interaction with YAP1. /evidence=ECO:0000269|PubMed:24581491 720..728
Rm62NP_524243.2 DEAD-like_helicase_N 231..669 CDD:475120 283/439 (64%)
Blue background indicates that the domain is not in the aligned region.

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