DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DDX17 and CG6418

DIOPT Version :10

Sequence 1:NP_001091974.1 Gene:DDX17 / 10521 HGNCID:2740 Length:731 Species:Homo sapiens
Sequence 2:NP_648413.1 Gene:CG6418 / 39218 FlyBaseID:FBgn0036104 Length:791 Species:Drosophila melanogaster


Alignment Length:731 Identity:249/731 - (34%)
Similarity:356/731 - (48%) Gaps:124/731 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    30 DSASERE--------SAAPAAAPTA----------EAPPPSVVTRPEPQALPSPAIRAPLPDLYP 76
            |...|:|        ..:|.|.||:          |.|....:.....|.......:||.|   |
  Fly    97 DEPREKEIEQAYIPAPGSPGAPPTSAKKQEDSDSDEDPLEQFMAGINQQVEKEKRQQAPKP---P 158

Human    77 FGTMRGGGFGDRDRDRDRGGF----------GARGGGG---LPPKKFGNPGERLRKKKWDLSELP 128
            ...:|    ||.|.:.|...:          |.|..|.   :...:.|||....:||  |:..||
  Fly   159 TQAVR----GDIDDEDDEESYYRYMKENPNAGLRDEGSDQEIEYDEDGNPIAPPKKK--DIDPLP 217

Human   129 ----------KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVM 183
                      .||||||.:|.::|.|...:|.||||...:.|.|... ||||.:|.|..|.:.::
  Fly   218 PIYHSEIEYEPFEKNFYTQHDDIAALDDEQVRELRRTLGVKVTGPSP-PKPVTSFGHFGFDEQLI 281

Human   184 DVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICL 248
            ..:....:|:|||||.|..|.||||||::|||:||||||.|::.|.::|:..|..|:.|||||.|
  Fly   282 KAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLKPGDGPIGL 346

Human   249 VLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGK 313
            :|||||||:.|:...|..:||...|...|.|||..|..|.:.||:|.||.:|||||:||.::...
  Fly   347 ILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKMKA 411

Human   314 TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQIN 378
            |||||.|:|||||||||..||||||:|.|.:.:|||||.||:|||:.|.:.:||.|.|.|..:|.
  Fly   412 TNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFKKRIERLARDVLSDPVRIV 476

Human   379 VGNLELSANHNILQIVDVCMES-EKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDG 442
            .|:|. .||.:|.|.|.|.... :|.:.|:..:.:.::  |...:|||..|...:.::..:....
  Fly   477 QGDLN-EANQDITQSVYVFPNPLQKWNWLLCHLVKFLS--EGSVLIFVTKKVDAETVSNNLLIKE 538

Human   443 WPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIG 507
            :..:.:|||..|.:|:.|:.:|:..:..||:|||||:||||:..::.|:|||.....|.:.||||
  Fly   539 YNCLLLHGDMDQADRNKVITQFKRKECDILVATDVAARGLDIPHIRNVVNYDTARDIETHTHRIG 603

Human   508 RTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLV-------------------- 552
            ||.|:..||.|||..|..:.:.|..|::.||.|:|.:...||:|.                    
  Fly   604 RTGRAGEKGNAYTLVTDKDKEFAGHLVRNLEGADQLVPDDLMELAMKSSWFRSSRFKQGKGKRPT 668

Human   553 -DHRG--------GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 608
             .|.|        ||||.|..|.|....:.||::|:                .|....|......
  Fly   669 NTHTGLGYREKGNGGGGYGSAGGSESTASVSAHSPS----------------DGPSSKAFSSSGP 717

Human   609 ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYG----------AGTYG 663
            .|||        |.:...||.:|.      ...:.|::..|...|..|.|          :.|.|
  Fly   718 ATDR--------YTAMREAFRSQY------NNQFRASSDRTWEKTLPESGVFAAPMAPPSSSTQG 768

Human   664 ASSTTSTGRSSQSSSQ 679
            ||::::...|:|.:.:
  Fly   769 ASASSANNSSNQDAKR 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DDX17NP_001091974.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..115 25/115 (22%)
DEAD-like_helicase_N 111..581 CDD:475120 207/509 (41%)
Q motif 171..199 8/27 (30%)
DEAD box 325..328 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 661..731 6/19 (32%)
Interaction with YAP1. /evidence=ECO:0000269|PubMed:24581491 720..728
CG6418NP_648413.1 SrmB 269..634 CDD:440279 160/367 (44%)
Blue background indicates that the domain is not in the aligned region.

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