DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FBXW10 and wds

DIOPT Version :10

Sequence 1:XP_047291077.1 Gene:FBXW10 / 10517 HGNCID:1211 Length:1103 Species:Homo sapiens
Sequence 2:NP_524984.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster


Alignment Length:338 Identity:75/338 - (22%)
Similarity:143/338 - (42%) Gaps:75/338 - (22%)


- Green bases have known domain annotations that are detailed below.


Human   391 IDPNYANKVSIPVPKMVDDGKSMRVKHPK------WKLRTKNE--YNLWTAYQNEETQQVLIEER 447
            :.|||..|.::.       |.:..|...|      |...:..:  ..:|.||..:..:.:     
  Fly    58 VKPNYTLKFTLA-------GHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI----- 110

Human   448 NVFCGTYNVRILSDTWDQNRVIHYSGGDLIAVSSNRKIHLLDIIQVKAIPVEFRGHAGSVRALFL 512
                ..:.:.|....|..:..:..||.|      ::.:.:.::...|::.. .:||:..|   |.
  Fly   111 ----SGHKLGISDVAWSSDSRLLVSGSD------DKTLKVWELSTGKSLKT-LKGHSNYV---FC 161

Human   513 CE---EENFLLSGSYDLSIRYWDLKSGVCTRIFGGHQGTITCMDLCKNR----LVSGGRDCQVKV 570
            |.   :.|.::|||:|.|:|.||:::|.|.:....|...::.:..  ||    :||...|...::
  Fly   162 CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRI 224

Human   571 WDVDTGKCLKTFRHKD--PILATRI--NDTYIVSSCERGLVKVWHIAMAQLVKTLSGHEGAVKCL 631
            ||..:|:||||....|  |:...:.  |..||:::.....:|:|..:..:.:||.:||:....|:
  Fly   225 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 289

Human   632 FFD------QWHLLSGSTDGLVMAWS---------MVGKYERCLMAFKHPKEVLDVSLLFLRVIS 681
            |.:      :| ::|||.|.:|..|:         :.|..:..|....||.|         .:|:
  Fly   290 FANFSVTGGKW-IVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTE---------NIIA 344

Human   682 ACA---DGKIRIY 691
            :.|   |..|:::
  Fly   345 SAALENDKTIKLW 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FBXW10XP_047291077.1 F-box_SF 299..367 CDD:459239
WD40 469..704 CDD:238121 62/252 (25%)
WD40 repeat 508..544 CDD:293791 13/38 (34%)
WD40 repeat 549..583 CDD:293791 12/37 (32%)
WD40 repeat 589..622 CDD:293791 7/34 (21%)
WD40 repeat 628..664 CDD:293791 11/50 (22%)
WD40 repeat 672..703 CDD:293791 4/23 (17%)
wdsNP_524984.1 WD40 <63..361 CDD:441893 72/333 (22%)
WD40 repeat 75..112 CDD:293791 6/45 (13%)
WD40 repeat 118..154 CDD:293791 5/42 (12%)
WD40 repeat 159..195 CDD:293791 14/38 (37%)
WD40 repeat 202..237 CDD:293791 12/36 (33%)
WD40 repeat 244..280 CDD:293791 7/35 (20%)
WD40 repeat 288..325 CDD:293791 9/37 (24%)
WD40 repeat 331..357 CDD:293791 8/34 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.