Sequence 1: | NP_001337049.1 | Gene: | SEMA3C / 10512 | HGNCID: | 10725 | Length: | 769 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260265.1 | Gene: | Sema1a / 34192 | FlyBaseID: | FBgn0011259 | Length: | 1131 | Species: | Drosophila melanogaster |
Alignment Length: | 592 | Identity: | 173/592 - (29%) |
---|---|---|---|
Similarity: | 291/592 - (49%) | Gaps: | 102/592 - (17%) |
- Green bases have known domain annotations that are detailed below.
Human 76 LMDEDQDRIYVGSKDHILSLNINNISQEALSVFWPASTIKVEECKMAGKDPTHGCGNFVRVIQTF 140
Human 141 NRTHLYVCGSGAFSPVC-TYLNRGRRSEDQVFMIDSKCESGKGRCSFNPNVNTVSVMINEELFSG 204
Human 205 MYIDFMGTDAAIFRSLTKRNAVRTDQHNSKWLSEPMFVDAHVIPDGTDPNDAKVYFFFKEKLTDN 269
Human 270 NRSTKQIHSMIARICPNDTGGLRSLVNKWTTFLKARLVCSVTDEDGPETHFDELEDVFLL---ET 331
Human 332 DNPRTTLVYGIFTTSSSVFKGSAVCVYHLSDIQTVFNGPFAHKEGPNHQLISY-QGRIPYPRPGT 395
Human 396 CPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNSIYPIHKRPLIVRIGTDYKYTKIAVD-RVNAAD 459
Human 460 GR-YHVLFLGTDRGTVQKVVVLPTNNSVS--GELILEELEVFKNHAPITTMKISSKKQ------- 514
Human 515 -----QLYVSSNEGVSQVSLHRCH---IYGTACADCCLARDPYCAWD-------GHSCSR----- 559
Human 560 -FY-----------PTGKRRSRRQDVRHGNPLTQCRGFNLKAYRNAAEIVQYGVKNNTTFLECAP 612
Human 613 KSPQASI 619 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SEMA3C | NP_001337049.1 | Sema_3C | 63..532 | CDD:200512 | 142/476 (30%) |
PSI | 531..568 | CDD:214655 | 21/63 (33%) | ||
Ig_Semaphorin_classIII | 593..682 | CDD:143279 | 8/27 (30%) | ||
Sema1a | NP_001260265.1 | Sema_1A | 91..546 | CDD:200498 | 142/476 (30%) |
PSI | 545..>579 | CDD:214655 | 15/35 (43%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |