Sequence 1: | NP_004254.2 | Gene: | SEMA4F / 10505 | HGNCID: | 10734 | Length: | 770 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
Alignment Length: | 810 | Identity: | 214/810 - (26%) |
---|---|---|---|
Similarity: | 343/810 - (42%) | Gaps: | 162/810 - (20%) |
- Green bases have known domain annotations that are detailed below.
Human 5 AARPRPGPGQPTASPFPLLLLAVLSG--PVSGRVPRSVPRTSLPISEADSCLTRFAVPHTYNYSV 67
Human 68 LLVDPASHTLYVGARDTIFALSLPFSG-ERPRRIDWMVPEAHRQNCRKKGKKEDECHNFVQILAI 131
Human 132 ANASHLLTCGTFAFDPKC---GVIDVSRFQ------------QVERLESGRGKCPFEPAQRSAAV 181
Human 182 MAGGVLYAATVKNYLGTEPIITRAVGRAEDWIRTDTLPSWLNAPAFVAAVALSPAEWGDEDGDDE 246
Human 247 IYFFFTETSRAFDSYERIKVPRVARVCAGDLGGRKTLQQRWTTFLKADLLCPGPEHGRASSVLQD 311
Human 312 VAVLRPELGAGT-PIFYGIFSSQWEGATISAVCAFRPQDIRTVLNGPFRELKHDCNRGLPVVDND 375
Human 376 VPQPRPGECITNNMKLRHFGSSLSLPDRVLTFIRDHPLMDRPVFPADGHPLLVTTDTAY--LRVV 438
Human 439 AH-RVTSLSGKEYDVLYLGTEDGHLHRAVRIGAQLS-------------VLEDLALFPEPQPVEN 489
Human 490 MKLYHS--WLLVGSRTEVTQVNTTNCGRLQSCSECILAQDPVCAWSFRLDECVAHA-GEH----R 547
Human 548 GLVQDIESADVSS--LCPKEPGERP------VVFEVPVATAAHVVLPCSPSSAWAS--CVWHQPS 602
Human 603 G----------VTALTP---------------RRDGLEVVVTPGAM------------GAYACEC 630
Human 631 QEGGAAHVVAAYSLVWGSQRDAPSRAHTVGAGLAGFFLGILAASLTLILIGRRQQRRRQRELLAR 695
Human 696 DKVGLDLGAPPSGTTSYSQDPPSPSPEDER 725 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SEMA4F | NP_004254.2 | Sema_4F | 52..511 | CDD:200522 | 148/493 (30%) |
PSI | 512..563 | CDD:279745 | 16/57 (28%) | ||
Ig_Sema4B_like | 570..649 | CDD:143280 | 21/123 (17%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 696..725 | 5/28 (18%) | |||
PDZ-binding. /evidence=ECO:0000250|UniProtKB:Q9Z123 | 768..770 | ||||
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 146/488 (30%) |
PSI | 510..>537 | CDD:214655 | 9/26 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |