Sequence 1: | XP_011525941.1 | Gene: | SEMA6B / 10501 | HGNCID: | 10739 | Length: | 894 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260265.1 | Gene: | Sema1a / 34192 | FlyBaseID: | FBgn0011259 | Length: | 1131 | Species: | Drosophila melanogaster |
Alignment Length: | 1080 | Identity: | 299/1080 - (27%) |
---|---|---|---|
Similarity: | 441/1080 - (40%) | Gaps: | 299/1080 - (27%) |
- Green bases have known domain annotations that are detailed below.
Human 14 LLLLLLLGGAHGLFPEEPPP---LSVAPRDYLNHYPVFVGSGPGRLTPAEGADDLNIQRVLRVNR 75
Human 76 TLFIGDRDNLYRVELEPPTSTELRYQRKLTWRSNPSDINVCRMKGKQEGECRNFVKVLLLRDEST 140
Human 141 LFVCGSNAFNPVC-------ANYSIDTLQPVGDNISGMARCPYDPKHANVALFSDGMLFTATVTD 198
Human 199 FLAIDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRV 263
Human 264 ARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQAVTGVV-----SLGGRPVVLAV 323
Human 324 FSTPSNSIPGSAVCAFDLTQVAAVFEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNAS 388
Human 389 SALPDDILNFVKTHPLMDEAVPSLGHAPWILRTLMRHQLTRVAVDVGAGPWGNQT--VVFLGSEA 451
Human 452 GTVLKFLVRPNASTSGTSGLSVFLEE------------FETYRPDRCGRPGGGETGQRLLSLELD 504
Human 505 AASGGLLAAFPRCVVRVPVARCQQYSGCMKSLVCSRNCIGSQDPYCGWAP-DGSC---------- 558
Human 559 --IF---LSPGTRAAF------EQDVSGASTSGLGDCTGLL---RASLSED-------------- 595
Human 596 RAGLVSVNLLVTSSVAAFVVGAVVS---GFSVGWFVGLRERRELARRKDKEAILAHGAGEAVLSV 657
Human 658 SRLGE-------RRAQGPGGRGGGGGGGAGVPPEALLAPLMQNGWAKATLLQGGPHDLDSGLLPT 715
Human 716 PEQTPLPQKRLPTPHPHPHALGP-------------------RAWDH-----GHPLL-------- 748
Human 749 ---------PASASSSLLLLAPARAPEQPPAPGEPT------PDGRLYAARPGRASHGDFPL--- 795
Human 796 ------TPHASPDRRR-------------VVSAPTGPLDPASAADGLPRPWS-----PPPTGSLR 836
Human 837 RPLGPHAPPA------ATLRRTH-------------------------------TFNSGEARPGD 864
Human 865 RHRGCH----------ARPGTDLAHLLPYGGADRTAPPVP 894 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SEMA6B | XP_011525941.1 | Sema_6B | 57..524 | CDD:200528 | 182/492 (37%) |
PSI | 525..>560 | CDD:279745 | 14/47 (30%) | ||
Sema1a | NP_001260265.1 | Sema_1A | 91..546 | CDD:200498 | 182/491 (37%) |
PSI | 545..>579 | CDD:214655 | 14/38 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 318 | 1.000 | Domainoid score | I1252 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 373 | 1.000 | Inparanoid score | I2116 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000892 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8465 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101616 | |
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X415 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.860 |